Evidence map›Paper›PMID 35196981›Full record

ArticleBMC plant biology2022

Genome-wide identification of Tomato Golden 2-Like transcription factors and abiotic stress related members screening.

Zi-Yu Wang, Shuang Zhao, Jun-Fang Liu, Hai-Yan Zhao, Xu-Ying Sun, Tai-Ru Wu, Tong Pei, Yue Wang, Qi-Feng Liu, Huan-Huan Yang and 5 more

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Genome-Wide Identification and Analysis of Plant Cysteine Oxidase (International journal of molecular sciences · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Genome-Wide Identification and Characterization ofMolecules (Basel, Switzerland) · 2022
    Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Zi-Yu WangKey Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs, College of Horticulture and Landscape Architecture, Northeast Agricultural University, No. 600, Changjiang Road, Heilongjiang Province, 150030, Harbin, P.R. China.
Shuang ZhaoKey Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs, College of Horticulture and Landscape Architecture, Northeast Agricultural University, No. 600, Changjiang Road, Heilongjiang Province, 150030, Harbin, P.R. China.
Jun-Fang LiuKey Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs, College of Horticulture and Landscape Architecture, Northeast Agricultural University, No. 600, Changjiang Road, Heilongjiang Province, 150030, Harbin, P.R. China.
Hai-Yan ZhaoKey Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs, College of Horticulture and Landscape Architecture, Northeast Agricultural University, No. 600, Changjiang Road, Heilongjiang Province, 150030, Harbin, P.R. China.
Xu-Ying SunKey Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs, College of Horticulture and Landscape Architecture, Northeast Agricultural University, No. 600, Changjiang Road, Heilongjiang Province, 150030, Harbin, P.R. China.
Tai-Ru WuKey Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs, College of Horticulture and Landscape Architecture, Northeast Agricultural University, No. 600, Changjiang Road, Heilongjiang Province, 150030, Harbin, P.R. China.
Tong PeiKey Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs, College of Horticulture and Landscape Architecture, Northeast Agricultural University, No. 600, Changjiang Road, Heilongjiang Province, 150030, Harbin, P.R. China.
Yue WangKey Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs, College of Horticulture and Landscape Architecture, Northeast Agricultural University, No. 600, Changjiang Road, Heilongjiang Province, 150030, Harbin, P.R. China.
Qi-Feng LiuKey Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs, College of Horticulture and Landscape Architecture, Northeast Agricultural University, No. 600, Changjiang Road, Heilongjiang Province, 150030, Harbin, P.R. China.
Huan-Huan YangKey Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs, College of Horticulture and Landscape Architecture, Northeast Agricultural University, No. 600, Changjiang Road, Heilongjiang Province, 150030, Harbin, P.R. China.
He ZhangKey Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs, College of Horticulture and Landscape Architecture, Northeast Agricultural University, No. 600, Changjiang Road, Heilongjiang Province, 150030, Harbin, P.R. China.
Jing-Bin JiangKey Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs, College of Horticulture and Landscape Architecture, Northeast Agricultural University, No. 600, Changjiang Road, Heilongjiang Province, 150030, Harbin, P.R. China.
Jing-Fu LiKey Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs, College of Horticulture and Landscape Architecture, Northeast Agricultural University, No. 600, Changjiang Road, Heilongjiang Province, 150030, Harbin, P.R. China.
Ting-Ting Zhao *Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs, College of Horticulture and Landscape Architecture, Northeast Agricultural University, No. 600, Changjiang Road, Heilongjiang Province, 150030, Harbin, P.R. China. ttzhao2016@163.com.
Xiang-Yang Xu *Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs, College of Horticulture and Landscape Architecture, Northeast Agricultural University, No. 600, Changjiang Road, Heilongjiang Province, 150030, Harbin, P.R. China. xxy709@126.com.
Northeast Agricultural University · CNMinistry of Agriculture and Rural Affairs · CN

Funding

"Hundred and ten million" Project Science and Technology Major Special Subject of Heilongjiang Province 2019ZX16B02National Natural Science Foundation of China 32072589Natural Science Funds for Distinguished Young Scholar of Heilongjiang Province YQ2021C013Postdoctoral science foundation of Heilongjiang province LBH-Z19046The China Agriculture Research System CARS-23-A11
6 · The paper itself

Abstract

backgroundGolden 2-Like (G2-like) transcription factors play an important role in plant development. However, the roles of these G2-like regulatory genes in response to abiotic stresses in tomato are not well understood.

resultsIn this study, we identified 66 putative G2-like genes in tomato (Solanum lycopersicum) and classified them into 5 groups (I to V) according to gene structure, motif composition and phylogenetic analysis. The G2-like genes were unevenly distributed across all 12 chromosomes. There were nine pairs of duplicated gene segments and four tandem duplicated SlGlk genes. Analysis of the cis-regulatory elements (CREs) showed that the promoter regions of SlGlks contain many kinds of stress- and hormone-related CREs. Based on RNA-seq, SlGlks were expressed in response to three abiotic stresses. Thirty-six differentially expressed SlGlks were identified; these genes have multiple functions according to Gene Ontology (GO) analysis and are enriched mainly in the zeatin biosynthesis pathway. Further studies exhibited that silencing SlGlk16 in tomato would reduce drought stress tolerance by earlier wilted, lower superoxide dismutase (SOD), peroxidase (POD) activities, less Pro contents and more MDA contents.

conclusionsOverall, the results of this study provide comprehensive information on G2-like transcription factors and G2-like genes that may be expressed in response to abiotic stresses.

Indexed as

Chromosome MappingDroughtsGene DuplicationGene Expression Regulation, PlantGenome-Wide Association StudyMalondialdehydePhylogenyPlant Growth RegulatorsPlant ProteinsProlineRegulatory Sequences, Nucleic AcidSolanum lycopersicumStress, PhysiologicalSuperoxide DismutaseTranscription FactorsMalondialdehydePlant Growth RegulatorsPlant ProteinsProlineSuperoxide DismutaseTranscription FactorsAbiotic stressesBioinformatics analysisExpression patternsG2-like familyTomato

Identifiers

PMID35196981
PMCPMC8864820
OpenAlexW4220990889

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.