Evidence map›Paper›PMID 35196065›Full record

ArticleMolecular biology of the cell2022

Phylogenetic profiling and cellular analyses of ARL16 reveal roles in traffic of IFT140 and INPP5E.

Skylar I Dewees, Romana Vargová, Katherine R Hardin, Rachel E Turn, Saroja Devi, Joshua Linnert, Uwe Wolfrum, Tamara Caspary, Marek Eliáš, Richard A Kahn

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Loss of U11/U12 spliceosome geneLife science alliance · 2026
    Article
  2. Article
  3. Review
  4. The intraflagellar transport cycle.Nature reviews. Molecular cell biology · 2025
    Review
  5. Article
  6. Regulation of INPP5E in Ciliogenesis, Development, and Disease.International journal of biological sciences · 2025
    Review
  7. Article
  8. Article
  9. Article
  10. Ciliogenesis membrane dynamics and organization.Seminars in cell & developmental biology · 2023
    Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Skylar I DeweesDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322.
Romana VargováDepartment of Biology and Ecology, Faculty of Science, University of Ostrava, CZ-710 00, Ostrava, Czech Republic.
Katherine R HardinDepartment of Cell Biology, Emory University School of Medicine, Atlanta, GA 30322.
Rachel E TurnDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322.
Saroja DeviDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322.
Joshua LinnertInstitute of Molecular Physiology, Johannes Gutenberg University, Mainz 55128, Germany.
Uwe WolfrumInstitute of Molecular Physiology, Johannes Gutenberg University, Mainz 55128, Germany.
Tamara CasparyDepartment of Human Genetics, Emory University School of Medicine, Atlanta, GA 30322.
Marek EliášDepartment of Biology and Ecology, Faculty of Science, University of Ostrava, CZ-710 00, Ostrava, Czech Republic.
Richard A KahnDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322.ORCID 0000-0002-0259-0601
Emory University · USJohannes Gutenberg University Mainz · DEUniversity of Ostrava · CZ

Funding

Molecular mechanisms of ARF family GTPasesR35GM122568 · NIGMS · EMORY UNIVERSITY · PI KAHN, RICHARD A · 2017 to 2024
$3.7M
Genetic Dissection of Signaling and CiliaR35GM122549 · NIGMS · EMORY UNIVERSITY · PI CASPARY, TAMARA J. · 2017 to 2021
$2.0M
ELMOD2: proposed roles in regulating mitochondrial fusion and cell cycleF31CA236493 · NCI · EMORY UNIVERSITY · PI TURN, RACHEL ELIZABETH · 2019 to 2021
$137k
A Role for the Calcium activated Chloride Channel TMEM16a in Primary CiliogenesisF31HD096815 · NICHD · EMORY UNIVERSITY · PI FISHER, SKYLAR · 2019 to 2021
$137k
NCI NIH HHS F31 CA236493NICHD NIH HHS F31 HD096815NIGMS NIH HHS R35 GM122549NIGMS NIH HHS R35 GM122568
6 · The paper itself

Abstract

The ARF family of regulatory GTPases is ancient, with 16 members predicted to have been present in the last eukaryotic common ancestor. Our phylogenetic profiling of paralogues in diverse species identified four family members whose presence correlates with that of a cilium/flagellum: ARL3, ARL6, ARL13, and ARL16. No prior evidence links ARL16 to cilia or other cell functions, despite its presence throughout eukaryotes. Deletion of ARL16 in mouse embryonic fibroblasts (MEFs) results in decreased ciliogenesis yet increased ciliary length. We also found

Indexed as

FibroblastsPhosphoric Monoester HydrolasesAnimalsCarrier ProteinsCiliaMicePhosphoinositide 5-PhosphatasesPhylogenyProteinsProtein TransportCarrier ProteinsIFT140 protein, mousePhosphoinositide 5-PhosphatasesPhosphoric Monoester HydrolasesProteins

Identifiers

PMID35196065
PMCPMC9250359
OpenAlexW4220664123

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.