Evidence map›Paper›PMID 35195842›Full record

ArticleFunctional & integrative genomics2022

Genome-wide comparative analysis of DNAJ genes and their co-expression patterns with HSP70s in aestivation of the sea cucumber Apostichopus japonicus.

Lei Gao, Zihao Yuan, Yunfeng Li, Zhen Ma

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Article in Functional & integrative genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Genome-Wide Association Analysis of Heat Tolerance in FInternational journal of molecular sciences · 2023
    Article
  2. Review
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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Lei GaoDalian Ocean University, Dalian, 116023, Liaoning, China. seamas_gao@163.com.ORCID http://orcid.org/0000-0003-2540-8363
Zihao YuanThe University of Texas Health Science Center at Houston, Houston, TX, 77030, USA.
Yunfeng LiLiaoning Ocean and Fisheries Science Research Institute, Dalian, 116023, Liaoning, China.
Zhen MaDalian Ocean University, Dalian, 116023, Liaoning, China. mazhen@dlou.edu.cn.

Funding

national key r&d program of china 2019YFD0901002natural science foundation of liaoning province 2019-ZD-0725
6 · The paper itself

Abstract

DNAJ proteins function as co-chaperones of HSP70 and play key roles in cell physiology to promote protein folding and degradation, especially under environmental stress. Based on our previous study on HSP70, a systematic study of DNAJ was performed in sea cucumber Apostichopus japonicus using the transcriptomic and genomic data, identifying 43 AjDNAJ genes, including six AjDNAJA genes, eight AjDNAJB genes, and 29 AjDNAJC genes. Slight expansion and conserved genomic structure were observed using the phylogenetic and syntenic analysis. Differential period-specific and tissue-specific expression patterns of AjDNAJs were observed between adult and juvenile individuals during aestivation. Strong tissue-specific expression correlations between AjDNAJ and AjHSP70 genes were found, indicating that the involvements of AjHSP70IVAs in the aestivation of sea cucumbers were regulated by AjDNAJs. Several key genes with significant expression correlations, such as AjDNAJB4L and AjHSP70IVAs, were suggested to function together under heat stress. Together, these findings provide early insight into the involvement of AjDNAJs in the aestivation and their roles as co-chaperones of AjHSP70s.

Indexed as

Sea CucumbersStichopusAnimalsEstivationHumansPhylogenyTranscriptomeAestivationCo-chaperoneDNAJHSP70Sea cucumber Apostichopus japonicus

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.