Evidence map›Paper›PMID 35194200›Full record

ArticleCancer gene therapy2022

Aberrant DNA methylation impacts HOX genes expression in bone marrow mesenchymal stromal cells of myelodysplastic syndromes and de novo acute myeloid leukemia.

Benjamin Roux, Frédéric Picou, Christelle Debeissat, Myriam Koubi, Nathalie Gallay, Pierre Hirsch, Noémie Ravalet, Marie C Béné, Michel Maigre, Mathilde Hunault and 6 more

Abstract read
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In one paragraph

Article in Cancer gene therapy, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
  3. Epigenetic alterations in Myeloid Malignancies.Advances in experimental medicine and biology · 2026
    Review
  4. Article
  5. Identification and validation ofFrontiers in immunology · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 2 countries.

Benjamin Roux *CNRS EMR 7001 LNOx "Leukemic niche & redox metabolism", Tours, France.
Frédéric Picou *CNRS EMR 7001 LNOx "Leukemic niche & redox metabolism", Tours, France.ORCID http://orcid.org/0000-0002-2066-2146
Christelle DebeissatCNRS EMR 7001 LNOx "Leukemic niche & redox metabolism", Tours, France.
Myriam KoubiCNRS EMR 7001 LNOx "Leukemic niche & redox metabolism", Tours, France.
Nathalie GallayCNRS EMR 7001 LNOx "Leukemic niche & redox metabolism", Tours, France.ORCID http://orcid.org/0000-0002-4236-4780
Pierre HirschSorbonne Université, Inserm, Centre de Recherche Saint-Antoine, CRSA, AP-HP, Hôpital Saint-Antoine, Service d'Hématologie Biologique, Paris, France.
Noémie RavaletCNRS EMR 7001 LNOx "Leukemic niche & redox metabolism", Tours, France.
Marie C BénéCHU de Nantes, Service d'Hématologie Biologique, CRCINA, Nantes, France.
Michel MaigreCH de Chartres, Chartres, France.
Mathilde HunaultFHU GOAL, Angers, France.
Jean MosserCHU de Rennes, Service de Génétique Moléculaire et Génomique, Rennes, France.
Amandine EtcheverryCHU de Rennes, Service de Génétique Moléculaire et Génomique, Rennes, France.
Emmanuel GyanCNRS EMR 7001 LNOx "Leukemic niche & redox metabolism", Tours, France.ORCID http://orcid.org/0000-0002-7651-9189
François DelhommeauSorbonne Université, Inserm, Centre de Recherche Saint-Antoine, CRSA, AP-HP, Hôpital Saint-Antoine, Service d'Hématologie Biologique, Paris, France.
Jorge DomenechCNRS EMR 7001 LNOx "Leukemic niche & redox metabolism", Tours, France.
Olivier HeraultCNRS EMR 7001 LNOx "Leukemic niche & redox metabolism", Tours, France. olivier.herault@univ-tours.fr.ORCID http://orcid.org/0000-0002-7419-1124
Université de Tours · FRInstitut de génétique et de développement de Rennes · FRCentre Hospitalier Universitaire de Nantes · FRCentre National de la Recherche Scientifique · FRFédération Hospitalo-Universitaire, Paris Center for Microbiome Medicine · FRInserm · FRLes Hôpitaux de Chartres · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA methylation, a major biological process regulating the transcription, contributes to the pathophysiology of hematologic malignancies, and hypomethylating agents are commonly used to treat myelodysplastic syndromes (MDS) and acute myeloid leukemias (AML). In these diseases, bone marrow mesenchymal stromal cells (MSCs) play a key supportive role through the production of various signals and interactions. The DNA methylation status of MSCs, likely to reflect their functionality, might be relevant to understand their contribution to the pathophysiology of these diseases. Consequently, the aim of our study was to analyze the modifications of DNA methylation profiles of MSCs induced by MDS or AML. MSCs from MDS/AML patients were characterized via 5-methylcytosine quantification, gene expression profiles of key regulators of DNA methylation, identification of differentially methylated regions (DMRs) by methylome array, and quantification of DMR-coupled genes expression. MDS and AML-MSCs displayed global hypomethylation and under-expression of DNMT1 and UHRF1. Methylome analysis revealed aberrant methylation profiles in all MDS and in a subgroup of AML-MSCs. This aberrant methylation was preferentially found in the sequence of homeobox genes, especially from the HOX family (HOXA1, HOXA4, HOXA5, HOXA9, HOXA10, HOXA11, HOXB5, HOXC4, and HOXC6), and impacted on their expression. These results highlight modifications of DNA methylation in MDS/AML-MSCs, both at global and focal levels dysregulating the expression of HOX genes well known for their involvement in leukemogenesis. Such DNA methylation in MSCs could be the consequence of the malignant disease or could participate in its development through defective functionality or exosomal transfer of HOX transcription factors from MSCs to hematopoietic cells.

Indexed as

Leukemia, Myeloid, AcuteMesenchymal Stem CellsMyelodysplastic SyndromesBone MarrowBone Marrow CellsCCAAT-Enhancer-Binding ProteinsDNA MethylationGenes, HomeoboxHumansTranscription FactorsUbiquitin-Protein LigasesCCAAT-Enhancer-Binding ProteinsTranscription FactorsUbiquitin-Protein LigasesUHRF1 protein, human

Identifiers

PMID35194200
OpenAlexW4212807206

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.