Evidence map›Paper›PMID 35192015›Full record

ArticleArchives of virology2022

Development of an immunofluorescence assay for detection of SARS-CoV-2.

Yafit Atiya-Nasagi, Elad Milrot, Efi Makdasi, Ofir Schuster, Shlomo Shmaya, Irit Simon, Amir Ben-Shmuel, Adi Beth-Din, Shay Weiss, Orly Laskar

Open access · bronzeAbstract read
In one paragraph

Article in Archives of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 60% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Yafit Atiya-Nasagi *The Department of Infectious Diseases, Israel Institute for Biological Research, Ness-Ziona, Israel.
Elad Milrot *The Department of Infectious Diseases, Israel Institute for Biological Research, Ness-Ziona, Israel.
Efi MakdasiThe Department of Infectious Diseases, Israel Institute for Biological Research, Ness-Ziona, Israel.
Ofir SchusterThe Department of Infectious Diseases, Israel Institute for Biological Research, Ness-Ziona, Israel.
Shlomo ShmayaThe Department of Infectious Diseases, Israel Institute for Biological Research, Ness-Ziona, Israel.
Irit SimonThe Department of Biotechnology, Israel Institute for Biological Research, Ness-Ziona, Israel.
Amir Ben-ShmuelThe Department of Infectious Diseases, Israel Institute for Biological Research, Ness-Ziona, Israel.
Adi Beth-DinThe Department of Biochemistry and Molecular Genetics, Israel Institute for Biological Research, Ness-Ziona, Israel.
Shay WeissThe Department of Infectious Diseases, Israel Institute for Biological Research, Ness-Ziona, Israel.
Orly LaskarThe Department of Infectious Diseases, Israel Institute for Biological Research, Ness-Ziona, Israel. orlyl@iibr.gov.il.ORCID http://orcid.org/0000-0003-3109-6554
Israel Institute for Biological Research · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SARS-CoV-2, the etiologic agent of the COVID-19 pandemic, emerged as the cause of a global crisis in 2019. Currently, the main method for identification of SARS-CoV-2 is a reverse transcription (RT)-PCR assay designed to detect viral RNA in oropharyngeal (OP) or nasopharyngeal (NP) samples. While the PCR assay is considered highly specific and sensitive, this method cannot determine the infectivity of the sample, which may assist in evaluation of virus transmissibility from patients and breaking transmission chains. Thus, cell-culture-based approaches such as cytopathic effect (CPE) assays are routinely employed for the identification of infectious viruses in NP/OP samples. Despite their high sensitivity, CPE assays take several days and require additional diagnostic tests in order to verify the identity of the pathogen. We have therefore developed a rapid immunofluorescence assay (IFA) for the specific detection of SARS-CoV-2 in NP/OP samples following cell culture infection. Initially, IFA was carried out on Vero E6 cultures infected with SARS-CoV-2 at defined concentrations, and infection was monitored at different time points. This test was able to yield positive signals in cultures infected with 10 pfu/ml at 12 hours postinfection (PI). Increasing the incubation time to 24 hours reduced the detectable infective dose to 1 pfu/ml. These IFA signals occur before the development of CPE. When compared to the CPE test, IFA has the advantages of specificity, rapid detection, and sensitivity, as demonstrated in this work.

Indexed as

COVID-19SARS-CoV-2Fluorescent Antibody TechniqueHumansNasopharynxPandemicsRNA, ViralSensitivity and SpecificityRNA, Viral

Identifiers

PMID35192015
PMCPMC8862410
OpenAlexW4212899759

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.