Evidence map›Paper›PMID 35191101›Full record

ArticleMolecular microbiology2022

Dual adhesive unipolar polysaccharides synthesized by overlapping biosynthetic pathways in Agrobacterium tumefaciens.

Maureen C Onyeziri, Gail G Hardy, Ramya Natarajan, Jing Xu, Ian P Reynolds, Jinwoo Kim, Peter M Merritt, Thomas Danhorn, Michael E Hibbing, Alexandra J Weisberg and 2 more

Open access · greenAbstract read
In one paragraph

Article in Molecular microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. An exopolysaccharide pathway from a freshwaterJournal of bacteriology · 2024
    Article
  5. A novel exopolysaccharide pathway from a freshwaterbioRxiv : the preprint server for biology · 2023
    Article
  6. Review
  7. TheAnnual review of microbiology · 2023
    Review
  8. Improved mini-TnApplied and environmental microbiology · 2023
    Article
  9. Review
  10. Article
  11. What Glues the Glue to the Cell Surface?Journal of bacteriology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Maureen C OnyeziriDepartment of Biology, Indiana University, Bloomington, Indiana, USA.ORCID 0000-0003-2885-8693
Gail G HardyDepartment of Biology, Indiana University, Bloomington, Indiana, USA.ORCID 0000-0002-6101-4217
Ramya NatarajanDepartment of Biology, Indiana University, Bloomington, Indiana, USA.
Jing XuDepartment of Biology, Indiana University, Bloomington, Indiana, USA.
Ian P ReynoldsDepartment of Biology, Indiana University, Bloomington, Indiana, USA.
Jinwoo KimDepartment of Biology, Indiana University, Bloomington, Indiana, USA.ORCID 0000-0003-1104-8088
Peter M MerrittDepartment of Biology, Indiana University, Bloomington, Indiana, USA.
Thomas DanhornDepartment of Biology, Indiana University, Bloomington, Indiana, USA.ORCID 0000-0002-3861-8602
Michael E HibbingDepartment of Biology, Indiana University, Bloomington, Indiana, USA.ORCID 0000-0002-0072-6210
Alexandra J WeisbergDepartment of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, USA.ORCID 0000-0002-0045-1368
Jeff H ChangDepartment of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, USA.ORCID 0000-0002-1833-0695
Clay FuquaDepartment of Biology, Indiana University, Bloomington, Indiana, USA.ORCID 0000-0001-7051-1760
Indiana University Bloomington · USOregon State University · US

Funding

TRAINING IN GENETICST32GM007757 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI KUMAR, JUSTIN P · 1985 to 2014
$8.1M
Biosynthesis and regulation of a unipolar polysaccharide in AgrobacteriumR01GM120337 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI FUQUA, WILLIAM C · 2017 to 2020
$1.4M
NIGMS NIH HHS R01 GM120337NIGMS NIH HHS T32 GM007757
6 · The paper itself

Abstract

Agrobacterium tumefaciens is a member of the Alphaproteobacteria that pathogenises plants and associates with biotic and abiotic surfaces via a single cellular pole. A. tumefaciens produces the unipolar polysaccharide (UPP) at the site of surface contact. UPP production is normally surface-contact inducible, but elevated levels of the second messenger cyclic diguanylate monophosphate (cdGMP) bypass this requirement. Multiple lines of evidence suggest that the UPP has a central polysaccharide component. Using an A. tumefaciens derivative with elevated cdGMP and mutationally disabled for other dispensable polysaccharides, a series of related genetic screens have identified a large number of genes involved in UPP biosynthesis, most of which are Wzx-Wzy-type polysaccharide biosynthetic components. Extensive analyses of UPP production in these mutants have revealed that the UPP is composed of two genetically, chemically, and spatially discrete forms of polysaccharide, and that each requires a specific Wzy-type polymerase. Other important biosynthetic, processing, and regulatory functions for UPP production are also revealed, some of which are common to both polysaccharides, and a subset of which are specific to each type. Many of the UPP genes identified are conserved among diverse rhizobia, whereas others are more lineage specific.

Indexed as

Agrobacterium tumefaciensBiosynthetic PathwaysAdhesivesBacterial ProteinsGene Expression Regulation, BacterialPolysaccharides, BacterialAdhesivesBacterial ProteinsPolysaccharides, Bacterialadhesinbiofilm formationexopolysaccharidespolar localizationtransposon mutagenesis

Identifiers

PMID35191101
PMCPMC9149101
OpenAlexW4220705360

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.