Evidence map›Paper›PMID 35190886›Full record

ArticleArchives of virology2022

Multiple variants of African swine fever virus circulating in Vietnam.

Van Tam Nguyen, Ki-Hyun Cho, Nguyen Tuan Anh Mai, Jee-Yong Park, Thi Bich Ngoc Trinh, Min-Kyung Jang, Thi Thu Huyen Nguyen, Xuan Dang Vu, Thi Lan Nguyen, Van Diep Nguyen and 3 more

Abstract read
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In one paragraph

Article in Archives of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Van Tam Nguyen *College of Veterinary Medicine, Vietnam National University of Agriculture, Hanoi, Vietnam.
Ki-Hyun Cho *Foreign Animal Disease Division, Animal and Plant Quarantine Agency, Gimcheon, South Korea.
Nguyen Tuan Anh MaiCollege of Veterinary Medicine, Vietnam National University of Agriculture, Hanoi, Vietnam.
Jee-Yong ParkForeign Animal Disease Division, Animal and Plant Quarantine Agency, Gimcheon, South Korea.
Thi Bich Ngoc TrinhCollege of Veterinary Medicine, Vietnam National University of Agriculture, Hanoi, Vietnam.
Min-Kyung JangForeign Animal Disease Division, Animal and Plant Quarantine Agency, Gimcheon, South Korea.
Thi Thu Huyen NguyenCollege of Veterinary Medicine, Vietnam National University of Agriculture, Hanoi, Vietnam.
Xuan Dang VuCollege of Veterinary Medicine, Vietnam National University of Agriculture, Hanoi, Vietnam.
Thi Lan NguyenCollege of Veterinary Medicine, Vietnam National University of Agriculture, Hanoi, Vietnam.
Van Diep NguyenCollege of Veterinary Medicine, Vietnam National University of Agriculture, Hanoi, Vietnam.
Aruna AmbagalaNational Centre for Foreign Animal Disease, Canadian Food Inspection Agency, Winnipeg, MB, Canada.
Yong-Joo KimForeign Animal Disease Division, Animal and Plant Quarantine Agency, Gimcheon, South Korea. kyjvet@korea.kr.
Van Phan LeCollege of Veterinary Medicine, Vietnam National University of Agriculture, Hanoi, Vietnam. letranphan@vnua.edu.vn.ORCID http://orcid.org/0000-0003-0583-4111

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

African swine fever (ASF) is a contagious and deadly viral disease affecting swine of all ages. ASF was first reported in Vietnam in February 2019, and it is now considered endemic in Vietnam. In this study, 122 ASF-positive samples collected from domestic pigs in 28 different provinces of northern, central, and southern Vietnam during outbreaks in 2019-2021 were genetically characterized. The findings confirmed that all ASF virus (ASFV) strains circulating in Vietnam belonged to p72 genotype II, p54 genotype II, CD2v serogroup 8, and CVR gene variant type I. However, further analysis based on the tandem repeat sequences located between I73R and I329L genes revealed that there were three different variants of ASFV, IGR I, II, and III, circulating in the domestic pig population in Vietnam. The IGR II variants were the most prevalent (117/122 strains) and were detected in pigs in all of the provinces tested, followed by IGR III (4/122 strains) and IGR I (1/122 strains). This study confirms for the first time the presence of IGR III variants in Vietnam.

Indexed as

African Swine FeverAfrican Swine Fever VirusAnimalsDisease OutbreaksGenotypePhylogenySequence Analysis, DNASus scrofaSwineVietnam

Identifiers

PMID35190886

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.