Evidence map›Paper›PMID 35190725›Full record

ArticleNature medicine2022

Ulcerative colitis is characterized by a plasmablast-skewed humoral response associated with disease activity.

Mathieu Uzzan, Jerome C Martin, Luka Mesin, Alexandra E Livanos, Tomas Castro-Dopico, Ruiqi Huang, Francesca Petralia, Giuliana Magri, Shashi Kumar, Qing Zhao and 46 more

Open access · greenAbstract read
In one paragraph

Article in Nature medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 159 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
159citing papers in PubMed, 1 pooled it
18.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

159 citing papers in PubMed, 1 synthesis or guideline pooled it, 221 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Review
  5. Article
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  13. Article
  14. NADAging cell · 2026
    Article
  15. Article
  16. Article
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  18. Regulation of Tph cell differentiation via farnesoid X receptor of dendritic cells in inflammatory bowel disease.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2026
    Article
  19. Review
  20. Local and circulating cytotoxic CD4medRxiv : the preprint server for health sciences · 2026
    Article

99 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

56 authors at 12 institutions in 4 countries.

Mathieu Uzzan *Henry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-7761-2879
Jerome C Martin *Precision Institute of Immunology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0003-0068-8776
Luka MesinLaboratory of Lymphocyte Dynamics, The Rockefeller University, New York, NY, USA.
Alexandra E LivanosHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Tomas Castro-DopicoHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-6964-5478
Ruiqi HuangDepartment of Population Health Science and Policy, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Francesca PetraliaDepartment of Genetics and Genomic Sciences, Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Giuliana MagriTranslational Clinical Research Program, Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain.ORCID http://orcid.org/0000-0002-0163-3542
Shashi KumarWashington University School of Medicine, St. Louis, MO, USA.
Qing ZhaoDepartment of Medicine, University of Alabama at Birmingham, Birmingham, AL, USA.
Adam K RosensteinHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Minami TokuyamaHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0001-6488-9687
Keshav SharmaHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Ryan UngaroHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Roman KosoyDepartment of Genetics and Genomic Sciences, Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Divya JhaHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-5038-241X
Jeremy FischerPrecision Institute of Immunology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0003-0001-4384
Harpriya SinghHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Mary E KeirBiomarker Discovery, OMNI, Genentech Inc., South San Francisco, CA, USA.ORCID http://orcid.org/0000-0002-0637-4092
Nandhini RamamoorthiBiomarker Discovery, OMNI, Genentech Inc., South San Francisco, CA, USA.
William E O'GormanOMNI Biomarker Development, Genentech Inc., South San Francisco, CA, USA.
Benjamin L CohenHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Adeeb RahmanDepartment of Genetics and Genomic Sciences, Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Francesca CossariniPrecision Institute of Immunology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-8793-5241
Akihiro SekiHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Louise LeyreHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Sonia Tejedor VaqueroTranslational Clinical Research Program, Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain.ORCID http://orcid.org/0000-0003-2873-4981
Sakteesh GurunathanHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Emilie K GrassetPrecision Institute of Immunology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-9592-1640
Bojan LosicDepartment of Population Health Science and Policy, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Marla DubinskyHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Alexander J GreensteinDepartment of Surgery, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Zoe GottliebHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Peter LegnaniHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
James GeorgeHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Haritz IrizarDepartment of Genetics and Genomic Sciences, Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Aleksandar StojmirovicJanssen R&D, Spring House, Philadelphia, PA, USA.
Carrie BrodmerkelJanssen R&D, Spring House, Philadelphia, PA, USA.
Andrew KasarkisDepartment of Population Health Science and Policy, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Bruce E SandsHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Glaucia FurtadoPrecision Institute of Immunology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Sergio A LiraPrecision Institute of Immunology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-6742-3089
Zewen K TuongMolecular Immunity Unit, Department of Medicine, University of Cambridge, Cambridge, UK.
Huaibin M KoDepartment of Pathology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0003-1062-2383
Andrea CeruttiPrecision Institute of Immunology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Charles O ElsonDepartment of Medicine, University of Alabama at Birmingham, Birmingham, AL, USA.
Menna R ClatworthyMolecular Immunity Unit, Department of Medicine, University of Cambridge, Cambridge, UK.
Miriam MeradPrecision Institute of Immunology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-4481-7827
Mayte Suárez-FariñasDepartment of Population Health Science and Policy, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Carmen ArgmannDepartment of Population Health Science and Policy, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-1110-8012
Jason A HackneyBioinformatics and Computational Biology, Genentech Inc., South San Francisco, CA, USA.ORCID http://orcid.org/0000-0002-5922-563X
Gabriel D VictoraLaboratory of Lymphocyte Dynamics, The Rockefeller University, New York, NY, USA.ORCID http://orcid.org/0000-0001-8807-348X
Gwendalyn J RandolphWashington University School of Medicine, St. Louis, MO, USA.ORCID http://orcid.org/0000-0001-9045-1195
Ephraim KenigsbergPrecision Institute of Immunology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Jean Frederic ColombelHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Saurabh MehandruHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA. saurabh.mehandru@mssm.edu.ORCID http://orcid.org/0000-0001-9781-2969
Icahn School of Medicine at Mount Sinai · USCenter for Information Technology · USUniversity of Cambridge · GBHospital Del Mar · ESRockefeller University · USSpringhouse · USUniversity of Alabama at Birmingham · USWashington University in St. Louis · USImmunai (United States) · USInserm · FRInstitució Catalana de Recerca i Estudis Avançats · ESUniversité Paris-Est Créteil · FR

Funding

Regulation of IgA class switching in the intestinal mucosaP01AI061093 · NIAID · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI CUNNINGHAM-RUNDLES, CHARLOTTE · 2004 to 2021
$29.8M
Dynamics of Antigen-Driven Selection in Germinal CentersR01AI119006 · NIAID · ROCKEFELLER UNIVERSITY · PI Gabriel D Victora · 2017 to 2026
$5.7M
Mechanisms associated with flares and remission in colitisR01DK110352 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI LIRA, SERGIO A. · 2017 to 2025
$5.1M
Determination of mucosal immune responses to, and infection of the gastrointestinal tract by Severe Acute Respiratory Syndrome Coronavirus-2 (SARS-CoV-2)R01DK123749 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI CERUTTI, ANDREA, FAITH, JEREMIAH JAMES · 2020 to 2024
$4.9M
B cell clonal selection in gut-associated germinal centersR01AI157137 · NIAID · ROCKEFELLER UNIVERSITY · PI Daniel S Mucida, Gabriel D Victora · 2020 to 2026
$4.8M
Mechanisms that alter lymphatic transport in inflammatory bowel diseaseR01AI168044 · NIAID · WASHINGTON UNIVERSITY · PI Gwendalyn J Randolph · 2022 to 2026
$2.8M
Mechanisms associated with diet-induced colitisR01DK121009 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI LIRA, SERGIO A. · 2020 to 2023
$2.4M
Medical Research Council MR/N024907/1NIAID NIH HHS P01 AI061093NIAID NIH HHS R01 AI119006NIAID NIH HHS R01 AI157137NIAID NIH HHS R01 AI168044NIDDK NIH HHS R01 DK110352NIDDK NIH HHS R01 DK121009NIDDK NIH HHS R01 DK123749Wellcome TrustWellcome Trust 220268/Z/20/Z
6 · The paper itself

Abstract

B cells, which are critical for intestinal homeostasis, remain understudied in ulcerative colitis (UC). In this study, we recruited three cohorts of patients with UC (primary cohort, n = 145; validation cohort 1, n = 664; and validation cohort 2, n = 143) to comprehensively define the landscape of B cells during UC-associated intestinal inflammation. Using single-cell RNA sequencing, single-cell IgH gene sequencing and protein-level validation, we mapped the compositional, transcriptional and clonotypic landscape of mucosal and circulating B cells. We found major perturbations within the mucosal B cell compartment, including an expansion of naive B cells and IgG

Indexed as

Colitis, UlcerativePlasma CellsB-LymphocytesHumansIntestinal MucosaLymphocyte CountT-Lymphocytes, Helper-Inducer

Identifiers

PMID35190725
PMCPMC9107072
OpenAlexW4212883490

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.