Evidence map›Paper›PMID 35190547›Full record

ArticleNature communications2022

Disentangling the recognition complexity of a protein hub using a nanopore.

Lauren Ashley Mayse, Ali Imran, Motahareh Ghahari Larimi, Michael S Cosgrove, Aaron James Wolfe, Liviu Movileanu

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 31 citations in OpenAlex.

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  19. Interplay of Affinity and Surface Tethering in Protein Recognition.The journal of physical chemistry letters · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Lauren Ashley MayseDepartment of Physics, Syracuse University, 201 Physics Building, Syracuse, NY, 13244-1130, USA.ORCID http://orcid.org/0000-0001-8790-0324
Ali ImranDepartment of Physics, Syracuse University, 201 Physics Building, Syracuse, NY, 13244-1130, USA.
Motahareh Ghahari LarimiDepartment of Physics, Syracuse University, 201 Physics Building, Syracuse, NY, 13244-1130, USA.
Michael S CosgroveDepartment of Biochemistry and Molecular Biology, State University of New York - Upstate Medical University, 4249 Weiskotten Hall, 766 Irving Avenue, Syracuse, NY, 13210, USA.
Aaron James WolfeDepartment of Physics, Syracuse University, 201 Physics Building, Syracuse, NY, 13244-1130, USA.
Liviu MovileanuDepartment of Physics, Syracuse University, 201 Physics Building, Syracuse, NY, 13244-1130, USA. lmovilea@syr.edu.ORCID http://orcid.org/0000-0002-2525-3341
Syracuse University · USNational Institutes of Health · USSUNY College of Environmental Science and Forestry · USSUNY Upstate Medical University · US

Funding

Molecular Mechanisms for the Assembly and Regulation of the MLL1 Core ComplexR01CA140522 · NCI · UPSTATE MEDICAL UNIVERSITY · PI COSGROVE, MICHAEL S. · 2010 to 2019
$3.6M
Disentanglement of the MLL-WDR5 Protein-Protein Recognition EventsR01GM129429 · NIGMS · SYRACUSE UNIVERSITY · PI MOVILEANU, LIVIU · 2018 to 2021
$1.3M
NCI NIH HHS R01 CA140522NIGMS NIH HHS R01 GM129429
6 · The paper itself

Abstract

WD40 repeat proteins are frequently involved in processing cell signaling and scaffolding large multi-subunit machineries. Despite their significance in physiological and disease-like conditions, their reversible interactions with other proteins remain modestly examined. Here, we show the development and validation of a protein nanopore for the detection and quantification of WD40 repeat protein 5 (WDR5), a chromatin-associated hub involved in epigenetic regulation of histone methylation. Our nanopore sensor is equipped with a 14-residue Win motif of mixed lineage leukemia 4 methyltransferase (MLL4

Indexed as

NanoporesAmino Acid MotifsHistone-Lysine N-MethyltransferaseHumansIntracellular Signaling Peptides and ProteinsLigandsProtein BindingProtein EngineeringWD40 RepeatsHistone-Lysine N-MethyltransferaseIntracellular Signaling Peptides and ProteinsLigandsMLL4 protein, humanWDR5 protein, human

Identifiers

PMID35190547
PMCPMC8861093
OpenAlexW4213270231

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.