Evidence map›Paper›PMID 35189973›Full record

ArticleStem cell research & therapy2022

Modeling oxidative injury response in human kidney organoids.

Aneta Przepiorski, Thitinee Vanichapol, Eugenel B Espiritu, Amanda E Crunk, Emily Parasky, Michael D McDaniels, Dave R Emlet, Ryan Salisbury, Cassandra L Happ, Lawrence A Vernetti and 6 more

Open access · goldAbstract read
In one paragraph

Article in Stem cell research & therapy, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 29 citations in OpenAlex.

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  16. Large-Scale Production of Kidney Organoids from Human Pluripotent Stem Cells.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  17. Article
  18. Review
  19. Physiology assays in human kidney organoids.American journal of physiology. Renal physiology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 2 countries.

Aneta PrzepiorskiDepartment of Developmental Biology, University of Pittsburgh, School of Medicine, 3501 5th Ave., 5061 BST3, Pittsburgh, PA, 15213, USA.
Thitinee VanichapolDepartment of Molecular Medicine and Pathology, School of Medical Sciences, University of Auckland, Auckland, New Zealand.
Eugenel B EspirituDepartment of Developmental Biology, University of Pittsburgh, School of Medicine, 3501 5th Ave., 5061 BST3, Pittsburgh, PA, 15213, USA.
Amanda E CrunkDepartment of Developmental Biology, University of Pittsburgh, School of Medicine, 3501 5th Ave., 5061 BST3, Pittsburgh, PA, 15213, USA.
Emily ParaskyDepartment of Developmental Biology, University of Pittsburgh, School of Medicine, 3501 5th Ave., 5061 BST3, Pittsburgh, PA, 15213, USA.
Michael D McDanielsDepartment of Developmental Biology, University of Pittsburgh, School of Medicine, 3501 5th Ave., 5061 BST3, Pittsburgh, PA, 15213, USA.
Dave R EmletCenter for Critical Care Nephrology, University of Pittsburgh, School of Medicine, 3501 5th Ave., 5061 BST3, Pittsburgh, PA, 15213, USA.
Ryan SalisburyDepartment of Psychiatry, University of Pittsburgh, School of Medicine, 3501 5th Ave., 5061 BST3, Pittsburgh, PA, 15213, USA.
Cassandra L HappDepartment of Psychiatry, University of Pittsburgh, School of Medicine, 3501 5th Ave., 5061 BST3, Pittsburgh, PA, 15213, USA.
Lawrence A VernettiDepartment of Computational and Systems Biology, University of Pittsburgh, School of Medicine, 3501 5th Ave., 5061 BST3, Pittsburgh, PA, 15213, USA.
Matthew L MacDonaldDepartment of Psychiatry, University of Pittsburgh, School of Medicine, 3501 5th Ave., 5061 BST3, Pittsburgh, PA, 15213, USA.
John A KellumCenter for Critical Care Nephrology, University of Pittsburgh, School of Medicine, 3501 5th Ave., 5061 BST3, Pittsburgh, PA, 15213, USA.
Thomas R KleymanRenal-Electrolyte Division, Department of Medicine, University of Pittsburgh, School of Medicine, 3501 5th Ave., 5061 BST3, Pittsburgh, PA, 15213, USA.
Catherine J BatyRenal-Electrolyte Division, Department of Medicine, University of Pittsburgh, School of Medicine, 3501 5th Ave., 5061 BST3, Pittsburgh, PA, 15213, USA.
Alan J DavidsonDepartment of Molecular Medicine and Pathology, School of Medical Sciences, University of Auckland, Auckland, New Zealand.
Neil A HukriedeDepartment of Developmental Biology, University of Pittsburgh, School of Medicine, 3501 5th Ave., 5061 BST3, Pittsburgh, PA, 15213, USA. hukriede@pitt.edu.ORCID 0000-0002-9655-9030
University of Pittsburgh · USUniversity of Auckland · NZ

Funding

Single Nephron and MetabolomicsP30DK079307 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KLEYMAN, THOMAS R · 2008 to 2022
$13.4M
Regulation of Renal Progenitor Cells in Regenerating KidneysR01DK069403 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HUKRIEDE, NEIL A · 2006 to 2020
$4.8M
Therapeutic Optimization of Productive Repair After Acute Kidney InjuryUC2DK126122 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DAVIDSON, ALAN, DE CAESTECKER, MARK P. · 2020 to 2024
$3.2M
Renal and Epithelial Biology Training ProgramT32DK061296 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KLEYMAN, THOMAS R · 2002 to 2022
$3.1M
NIDDK NIH HHS 1P30DK079307NIDDK NIH HHS 2R01DK069403NIDDK NIH HHS 2UC2DK126122NIDDK NIH HHS P30 DK079307NIDDK NIH HHS R01 DK069403NIDDK NIH HHS T32 DK061296NIDDK NIH HHS T32DK061296NIDDK NIH HHS UC2 DK126122
6 · The paper itself

Abstract

backgroundHemolysis occurs in many injury settings and can trigger disease processes. In the kidney, extracellular hemoglobin can induce damage via several mechanisms. These include oxidative stress, mitochondrial dysfunction, and inflammation, which promote fibrosis and chronic kidney disease. Understanding the pathophysiology of these injury pathways offers opportunities to develop new therapeutic strategies.

methodsTo model hemolysis-induced kidney injury, human kidney organoids were treated with hemin, an iron-containing porphyrin, that generates reactive oxygen species. In addition, we developed an induced pluripotent stem cell line expressing the biosensor, CytochromeC-GFP (CytoC-GFP), which provides a real-time readout of mitochondrial morphology, health, and early apoptotic events.

resultsWe found that hemin-treated kidney organoids show oxidative damage, increased expression of injury markers, impaired functionality of organic anion and cation transport and undergo fibrosis. Injury could be detected in live CytoC-GFP organoids by cytoplasmic localization of fluorescence. Finally, we show that 4-(phenylthio)butanoic acid, an HDAC inhibitor with anti-fibrotic effects in vivo, reduces hemin-induced human kidney organoid fibrosis.

conclusionThis work establishes a hemin-induced model of kidney organoid injury. This platform provides a new tool to study the injury and repair response pathways in human kidney tissue and will assist in the development of new therapeutics.

Indexed as

Pluripotent Stem CellsRenal Insufficiency, ChronicHumansKidneyOrganoidsOxidative StressCytochrome CHeminiPSCsKidney organoidsMitochondriaRenal injuryROS

Identifiers

PMID35189973
PMCPMC8862571
OpenAlexW4225367202

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.