Evidence map›Paper›PMID 35189041›Full record

ArticleMolecular genetics & genomic medicine2022

A novel unbalanced translocation between chromosomes 5p and 18q leading to dysmorphology and global developmental delay.

Giavanna Verdi, Dong Li, Sarah H Elsea, Beverly Nelson, Elizabeth J Bhoj, Hakon Hakonarson, Katherine R Yearwood, Sharmila Upadhya, Sarah Gluschitz, Janice L Smith and 1 more

Open access · goldAbstract readCase Reports
In one paragraph

Article in Molecular genetics & genomic medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Giavanna VerdiDepartment of Biochemistry, St. George's University School of Medicine, True Blue, Grenada.ORCID 0000-0001-5384-7318
Dong LiCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.ORCID 0000-0002-2265-6727
Sarah H ElseaDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0002-1400-8519
Beverly NelsonClinical Teaching Unit, St. George's University School of Medicine, True Blue, Grenada.
Elizabeth J BhojCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.ORCID 0000-0001-5748-3507
Hakon HakonarsonCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.ORCID 0000-0003-2814-7461
Katherine R YearwoodSt. George's University Clinic, St. George's, Grenada.
Sharmila UpadhyaDepartment of Biochemistry, St. George's University School of Medicine, True Blue, Grenada.
Sarah GluschitzDepartment of Anatomical Sciences, St. George's University, True Blue, Grenada.
Janice L SmithDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.
Andrew K SoberingDepartment of Biochemistry, St. George's University School of Medicine, True Blue, Grenada.ORCID 0000-0002-9251-2614
St. George's University · GDChildren's Hospital of Philadelphia · USBaylor College of Medicine · US

Funding

The Intellectual and Developmental Disabilities Research Center (IDDRC) at CHOP/PennP50HD105354 · NICHD · CHILDREN'S HOSP OF PHILADELPHIA · PI ERIC D MARSH, ROBERT Thomas SCHULTZ · 2021 to 2026
$9.2M
NICHD NIH HHS P50 HD105354
6 · The paper itself

Abstract

backgroundIndividuals with various sized terminal duplications of chromosome 5p or terminal deletions of chromosome 18q have been described. These aberrations may cause congenital malformations and intellectual disability of varying severity.

methodsVia an international collaborative effort, we obtained a cytogenetic diagnosis for a 5-year-old boy of Afro-Caribbean ancestry who has global developmental delay, dysmorphology, hypotonia, feeding difficulties, bilateral club feet, and intellectual disability.

resultsConventional G-banded karyotyping showed additional chromatin of unknown origin on the long arm of chromosome 18. SNP microarray confirmed the loss of ~6.4 Mb from chromosome 18q: arr[hg19] 18q22.3-q23(71,518,518-77,943,115)x1. The source of the additional chromatin was determined from the microarray to be ~32 Mb from the short arm of chromosome 5 (arr[hg19] 5p13.3-p15.33(51,045-32,062,984)x3). The unbalanced translocation was verified by fluorescent in situ hybridization (FISH). Both parents are healthy and have normal karyotypes suggesting that this abnormality arose de novo in the proband, although gonadal mosaicism in a parent cannot be excluded.

conclusionThe combination of clinical features in this individual is most likely due to the partial deletion of 18q and partial duplication of 5p, which to our knowledge has not been previously described.

Indexed as

Chromosomes, Human, Pair 18Intellectual DisabilityChromatinHumansIn Situ Hybridization, FluorescenceTranslocation, GeneticChromatindeveloping economydysmorphologyglobal developmental delaylow-income nationmiddle-income nationresource-limited communityunbalanced translocation

Identifiers

PMID35189041
PMCPMC9000934
OpenAlexW4212868707

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.