Evidence map›Paper›PMID 35188198›Full record

ArticleThe Plant cell2022

Activation and negative feedback regulation of SlHY5 transcription by the SlBBX20/21-SlHY5 transcription factor module in UV-B signaling.

Guoqian Yang, Chunli Zhang, Huaxi Dong, Xiaorui Liu, Huicong Guo, Boqin Tong, Fang Fang, Yiyang Zhao, Yunji Yu, Yue Liu and 2 more

Abstract read
In one paragraph

Article in The Plant cell, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Molecular breeding of tomato: Advances and challenges.Journal of integrative plant biology · 2025
    Review
  7. Article
  8. Elucidating the Role ofInternational journal of molecular sciences · 2024
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Genome-Wide Characterization of B-Box Gene Family inInternational journal of molecular sciences · 2023
    Article
  15. Review
  16. Article
  17. Genes · 2022
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Guoqian YangShanghai Cooperative Innovation Center for Modern Seed Industry/School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0002-1045-4562
Chunli ZhangShanghai Cooperative Innovation Center for Modern Seed Industry/School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0003-2431-607X
Huaxi DongShanghai Cooperative Innovation Center for Modern Seed Industry/School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0002-6867-2642
Xiaorui LiuShanghai Cooperative Innovation Center for Modern Seed Industry/School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0002-1913-8953
Huicong GuoShanghai Cooperative Innovation Center for Modern Seed Industry/School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0003-1711-9158
Boqin TongShanghai Cooperative Innovation Center for Modern Seed Industry/School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0001-8046-4654
Fang FangShanghai Cooperative Innovation Center for Modern Seed Industry/School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0001-6595-4102
Yiyang ZhaoShanghai Cooperative Innovation Center for Modern Seed Industry/School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0002-5656-0547
Yunji YuZhiyuan College, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0001-5460-8183
Yue LiuShanghai Cooperative Innovation Center for Modern Seed Industry/School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0002-1900-5085
Li LinShanghai Cooperative Innovation Center for Modern Seed Industry/School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0003-3219-6020
Ruohe YinShanghai Cooperative Innovation Center for Modern Seed Industry/School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0001-6782-4651

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In tomato (Solanum lycopersicum) and other plants, the photoreceptor UV-RESISTANCE LOCUS 8 regulates plant UV-B photomorphogenesis by modulating the transcription of many genes, the majority of which depends on the transcription factor ELONGATED HYPOCOTYL 5 (HY5). HY5 transcription is induced and then rapidly attenuated by UV-B. However, neither the transcription factors that activate HY5 transcription nor the mechanism for its attenuation during UV-B signaling is known. Here, we report that the tomato B-BOX (BBX) transcription factors SlBBX20 and SlBBX21 interact with SlHY5 and bind to the SlHY5 promoter to activate its transcription. UV-B-induced SlHY5 expression and SlHY5-controlled UV-B responses are normal in slbbx20 and slbbx21 single mutants, but strongly compromised in the slbbx20 slbbx21 double mutant. Surprisingly, UV-B responses are also compromised in lines overexpressing SlBBX20 or SlBBX21. Both SlHY5 and SlBBX20 bind to G-box1 in the SlHY5 promoter. SlHY5 outcompetes SlBBX20 for binding to the SlHY5 promoter in vitro, and inhibits the association of SlBBX20 with the SlHY5 promoter in vivo. Overexpressing 35S:SlHY5-FLAG in the WT background inhibits UV-B-induced endogenous SlHY5 expression. Together, our results reveal the critical role of the SlBBX20/21-SlHY5 module in activating the expression of SlHY5, the gene product of which inhibits its own gene transcription under UV-B, forming an autoregulatory negative feedback loop that balances SlHY5 transcription in plants.

Indexed as

ArabidopsisArabidopsis ProteinsSolanum lycopersicumBasic-Leucine Zipper Transcription FactorsFeedbackGene Expression Regulation, PlantTranscription FactorsUltraviolet RaysArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsTranscription Factors

Identifiers

PMID35188198
PMCPMC9048894

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.