Evidence map›Paper›PMID 35184754›Full record

ArticleBiological research2022

The OxyR and SoxR transcriptional regulators are involved in a broad oxidative stress response in Paraburkholderia xenovorans LB400.

Valentina Méndez, Laura Rodríguez-Castro, Roberto E Durán, Gabriel Padrón, Michael Seeger

Abstract read
In one paragraph

Article in Biological research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

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  9. Nucleoid-associated proteins: molecular mechanisms in microbial adaptation.World journal of microbiology & biotechnology · 2025
    Review
  10. Article
  11. Article
  12. Review
  13. OxyR contributes to the oxidative stress capacity and virulence of hypervirulentFrontiers in cellular and infection microbiology · 2025
    Article
  14. Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Valentina MéndezLaboratorio de Microbiología Molecular y Biotecnología Ambiental, Departamento de Química and Centro de Biotecnología Dr. Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Avenida España, 1680, Valparaíso, Chile.ORCID https://orcid.org/0000-0001-9249-4586
Laura Rodríguez-CastroLaboratorio de Microbiología Molecular y Biotecnología Ambiental, Departamento de Química and Centro de Biotecnología Dr. Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Avenida España, 1680, Valparaíso, Chile.ORCID https://orcid.org/0000-0001-9974-4752
Roberto E DuránLaboratorio de Microbiología Molecular y Biotecnología Ambiental, Departamento de Química and Centro de Biotecnología Dr. Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Avenida España, 1680, Valparaíso, Chile.ORCID https://orcid.org/0000-0003-0077-9483
Gabriel PadrónCentro de Ingeniería Genética y Biotecnología, Ave. 31 No. 15802, Playa Havana, Cuba.ORCID https://orcid.org/0000-0003-3308-2471
Michael SeegerLaboratorio de Microbiología Molecular y Biotecnología Ambiental, Departamento de Química and Centro de Biotecnología Dr. Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Avenida España, 1680, Valparaíso, Chile. michael.seeger@gmail.com.ORCID http://orcid.org/0000-0002-3925-1996

Funding

ANID Programa de Investigación Asociativa Anillo GAMBIO ACT172128Fondecyt 1200756USM USM PI_M_2020_43
6 · The paper itself

Abstract

backgroundAerobic metabolism generates reactive oxygen species that may cause critical harm to the cell. The aim of this study is the characterization of the stress responses in the model aromatic-degrading bacterium Paraburkholderia xenovorans LB400 to the oxidizing agents paraquat and H

methodsAntioxidant genes were identified by bioinformatic methods in the genome of P. xenovorans LB400, and the phylogeny of its OxyR and SoxR transcriptional regulators were studied. Functionality of the transcriptional regulators from strain LB400 was assessed by complementation with LB400 SoxR of null mutant P. aeruginosa ΔsoxR, and the construction of P. xenovorans pIZoxyR that overexpresses OxyR. The effects of oxidizing agents on P. xenovorans were studied measuring bacterial susceptibility, survival and ROS formation after exposure to paraquat and H

resultsP. xenovorans LB400 possesses a wide repertoire of genes for the antioxidant defense including the oxyR, ahpC, ahpF, kat, trxB, dpsA and gorA genes, whose orthologous genes are regulated by the transcriptional regulator OxyR in E. coli. The LB400 genome also harbors the soxR, fumC, acnA, sodB, fpr and fldX genes, whose orthologous genes are regulated by the transcriptional regulator SoxR in E. coli. The functionality of the LB400 soxR gene was confirmed by complementation of null mutant P. aeruginosa ΔsoxR. Growth, susceptibility, and ROS formation assays revealed that LB400 cells were more susceptible to paraquat than H

conclusionsThis study showed that P. xenovorans LB400 possess a broad range oxidative stress response, which explain the high resistance of this strain to the oxidizing compounds paraquat and H

Indexed as

Escherichia coli ProteinsGene Expression Regulation, BacterialBacterial ProteinsBurkholderiaceaeChromatography, LiquidEscherichia coliHydrogen PeroxideOxidation-ReductionOxidative StressRepressor ProteinsTandem Mass SpectrometryBacterial ProteinsEscherichia coli ProteinsHydrogen PeroxideoxyR protein, E coliRepressor ProteinsHydrogen peroxideOxidative stressOxyRParaburkholderia xenovoransParaquatSoxRSuperoxide

Identifiers

PMID35184754
PMCPMC8859910

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.