Evidence map›Paper›PMID 35184747›Full record

ArticleBMC cancer2022

Developing a 5-gene prognostic signature for cervical cancer by integrating mRNA and copy number variations.

Wenxin Liu, Qiuying Jiang, Chao Sun, ShiHao Liu, Zhikun Zhao, Dongfang Wu

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Wenxin Liu *Department of Gynecological Oncology, Tianjin Medical Cancer Institute and Hospital, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy,Tianjin, Tianjin's Clinical Research Center for Cancer, West Huan-Hu Rd, Ti Yuan Bei, Hexi District, 300060, Tianjin, China. tj_liuwenxin@163.com.
Qiuying Jiang *Department of Internal Medicine, Second Affiliated College of Harbin Medical University, 246 Xuefu Road, Nangang District, Harbin City, 230100, Heilongjiang Province, China.
Chao Sun *YuceBio Technology Co., Ltd, 4th floor, phase I, dabaihui center, no.2002, Shenyan Road, Haishan street, Yantian District, Shenzhen City, 440300, Guangdong Province, China.
ShiHao LiuDepartment of Obstetrics and Gynecology, The Fourth Hospital of Hebei Medical University, NO.12, JianKang Road, Shijiazhuang, 130100, Hebei Province, China.
Zhikun ZhaoYuceBio Technology Co., Ltd, 4th floor, phase I, dabaihui center, no.2002, Shenyan Road, Haishan street, Yantian District, Shenzhen City, 440300, Guangdong Province, China.
Dongfang WuYuceBio Technology Co., Ltd, 4th floor, phase I, dabaihui center, no.2002, Shenyan Road, Haishan street, Yantian District, Shenzhen City, 440300, Guangdong Province, China.
Fourth Hospital of Hebei Medical University · CNHarbin Medical University · CNTianjin Medical University Cancer Institute and Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCervical cancer is frequently detected gynecological cancer all over the world. This study was designed to develop a prognostic signature for an effective prediction of cervical cancer prognosis.

methodsDifferentially expressed genes (DEGs) were identified based on copy number variation (CNV) data and expression profiles from different databases. A prognostic model was constructed and further optimized by stepwise Akaike information criterion (stepAIC). The model was then evaluated in three groups (training group, test group and validation group). Functional analysis and immune analysis were used to assess the difference between high-risk and low-risk groups.

resultsThe study developed a 5-gene prognostic model that could accurately classify cervical cancer samples into high-risk and low-risk groups with distinctly different prognosis. Low-risk group exhibited more favorable prognosis and higher immune infiltration than high-risk group. Both univariate and multivariate Cox regression analysis showed that the risk score was an independent risk factor for cervical cancer.

conclusionsThe 5-gene prognostic signature could serve as a predictor for identifying high-risk cervical cancer patients, and provided potential direction for studying the mechanism or drug targets of cervical cancer. The integrated analysis of CNV and mRNA expanded a new perspective for exploring prognostic signatures in cervical cancer.

Indexed as

NomogramsBiomarkers, TumorDatabases, GeneticDNA Copy Number VariationsFemaleHumansPredictive Value of TestsPrognosisProportional Hazards ModelsReproducibility of ResultsRisk AssessmentRisk FactorsRNA, MessengerUterine Cervical NeoplasmsBiomarkers, TumorRNA, MessengerBioinformaticsCervical cancerCopy number variationsDifferential expressed genesPrognostic signature

Identifiers

PMID35184747
PMCPMC8859909
OpenAlexW4212983658

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.