Evidence map›Paper›PMID 35184547›Full record

ArticleBiochemistry2022

Metal Dependence and Functional Diversity of Type I Cas3 Nucleases.

Sining Sun, Zunyu He, Paul Jiang, Rishika Baral, Maria-Eirini Pandelia

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Transition metal activation reframes SAMHD1 regulation.bioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Review
  5. The Fe and Zn cofactor dilemma.Biochimica et biophysica acta. Proteins and proteomics · 2023
    Review
  6. Biochemistry · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Sining SunDepartment of Biochemistry, Brandeis University, Waltham, Massachusetts 02453, United States.
Zunyu HeYale University, New Haven, Connecticut 06520-8055, United States.
Paul JiangDepartment of Biochemistry, Brandeis University, Waltham, Massachusetts 02453, United States.
Rishika BaralDepartment of Biochemistry, Brandeis University, Waltham, Massachusetts 02453, United States.
Maria-Eirini PandeliaDepartment of Biochemistry, Brandeis University, Waltham, Massachusetts 02453, United States.ORCID 0000-0002-6750-1948
Brandeis University · USYale University · US

Funding

How does a metallofactor in Hepatitis B viral protein X orchestrate pathogenesis and liver cancerR01GM126303 · NIGMS · BRANDEIS UNIVERSITY · PI PANDELIA, MARIA-EIRINI · 2019 to 2023
$1.8M
Functional diversification of the HD-superfamily; the Hydrolase/Oxygenase DilemmaR00GM111978 · NIGMS · BRANDEIS UNIVERSITY · PI PANDELIA, MARIA-EIRINI · 2016 to 2018
$740k
Functional diversification of the HD-superfamily; the Hydrolase/Oxygenase DilemmaK99GM111978 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI PANDELIA, MARIA-EIRINI · 2014 to 2015
$107k
NIGMS NIH HHS K99 GM111978NIGMS NIH HHS R00 GM111978NIGMS NIH HHS R01 GM126303
6 · The paper itself

Abstract

Type I CRISPR-Cas systems provide prokaryotes with protection from parasitic genetic elements by cleaving foreign DNA. In addition, they impact bacterial physiology by regulating pathogenicity and virulence, making them key players in adaptability and evolution. The signature nuclease Cas3 is a phosphodiesterase belonging to the HD-domain metalloprotein superfamily. By directing specific metal incorporation, we map a promiscuous metal ion cofactor profile for Cas3 from

Indexed as

CRISPR-Associated ProteinsCRISPR-Cas SystemsDNADNA HelicasesDNA, Single-StrandedEndonucleasesMetalsCRISPR-Associated ProteinsDNADNA HelicasesDNA, Single-StrandedEndonucleasesMetals

Identifiers

PMID35184547
PMCPMC9109717
OpenAlexW4213201035

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.