Evidence map›Paper›PMID 35184359›Full record

ArticleJournal of applied microbiology2022

Esculin hydrolysis negative and TcdA-only producing strains of Clostridium (Clostridioides) difficile from the environment in Western Australia.

Nirajmohan Shivaperumal, Daniel R Knight, Korakrit Imwattana, Grace O Androga, Barbara J Chang, Thomas V Riley

Abstract read
In one paragraph

Article in Journal of applied microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Colonization Dynamics ofVeterinary sciences · 2026
    Article
  2. Clinical and Molecular Advances on the Black YeastInternational journal of molecular sciences · 2025
    Review
  3. Applied and environmental microbiology · 2025
    Article
  4. Microbial genomics · 2025
    Article
  5. Distribution ofEmerging microbes & infections · 2024
    Article
  6. Article
  7. Review
  8. Complete Genome Sequences of Evolutionary Clade C-III Strains ofMicrobiology resource announcements · 2023
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Nirajmohan ShivaperumalSchool of Biomedical Sciences, Faculty of Health and Medical Sciences, The University of Western Australia, Queen Elizabeth II Medical Centre, Nedlands, Western Australia, Australia.ORCID https://orcid.org/0000-0003-4419-8947
Daniel R KnightBiosecurity and One Health Research Centre, Harry Butler Institute, Murdoch University, Murdoch, Western Australia, Australia.
Korakrit ImwattanaSchool of Biomedical Sciences, Faculty of Health and Medical Sciences, The University of Western Australia, Queen Elizabeth II Medical Centre, Nedlands, Western Australia, Australia.
Grace O AndrogaSchool of Biomedical Sciences, Faculty of Health and Medical Sciences, The University of Western Australia, Queen Elizabeth II Medical Centre, Nedlands, Western Australia, Australia.
Barbara J ChangSchool of Biomedical Sciences, Faculty of Health and Medical Sciences, The University of Western Australia, Queen Elizabeth II Medical Centre, Nedlands, Western Australia, Australia.
Thomas V RileySchool of Biomedical Sciences, Faculty of Health and Medical Sciences, The University of Western Australia, Queen Elizabeth II Medical Centre, Nedlands, Western Australia, Australia.ORCID https://orcid.org/0000-0002-1351-3740

Funding

Mahidol UniversityNational Health and Medical Research Council APP1138257
6 · The paper itself

Abstract

BACKGROUND AND

aimsClostridium (Clostridiodes) difficile clade 3 ribotype (RT) 023 strains that fail to produce black colonies on bioMérieux ChromID agar have been reported, as well as variant strains of C. difficile that produce only toxin A. We have recently isolated strains of C. difficile from the environment in Western Australia (WA) with similar characteristics. The objective of this study was to characterize these strains. It was hypothesized that a putative β-glucosidase gene was lacking in these strains of C. difficile, including RT 023, leading to white colonies. METHODS AND

resultsA total of 17 environmental isolates of C. difficile from garden soil and compost, and gardening shoe soles in Perth, WA, failed to produce black colonies on ChromID agar. MALDI-TOF MS analysis confirmed these strains as C. difficile. Four strains contained only a tcdA gene (A

conclusionsChromID C. difficile agar is used for the specific detection of C. difficile in the samples. To date, all strains except RT 023 strains from clinical samples hydrolyse esculin. This is the first report to provide insights into the identification of esculin hydrolysis negative and TcdA-only producing (A SIGNIFICANCE AND IMPACT OF THE STUDY: White colonies of C. difficile from environmental samples could be overlooked when using ChromID C. difficile agar, leading to false-negative results, however, whether these strains are truly pathogenic remains to be proven.

Indexed as

Bacterial ToxinsCellulasesClostridioides difficileAgarClostridioidesClostridiumEsculinHydrolysisWestern AustraliaAgarBacterial ToxinsCellulasesEsculinclade-IIIClostridium (Clostridioides) difficileenvironmentesculin hydrolysis negativeputative β glucosidase genetoxin A variantwhole-genome sequencing

Identifiers

PMID35184359
PMCPMC9544920

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.