Evidence map›Paper›PMID 35181714›Full record

ArticleScientific reports2022

An optimized method to obtain high-quality RNA from different tissues in Lilium davidii var. unicolor.

Chunlei Wang, Xuemei Hou, Nana Qi, Changxia Li, Yanyan Luo, Dongliang Hu, Yihua Li, Weibiao Liao

Abstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Chunlei WangCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Xuemei HouCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Nana QiCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Changxia LiCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Yanyan LuoCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Dongliang HuCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Yihua LiCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Weibiao LiaoCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China. liaowb@gsau.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The high quality, yield and purity total RNA samples are essential for molecular experiments. However, harvesting high quality RNA in Lilium davidii var. unicolor is a great challenge due to its polysaccharides, polyphenols and other secondary metabolites. In this study, different RNA extraction methods, namely TRIzol method, the modified TRIzol method, Kit method and cetyltrimethylammonium bromide (CTAB) method were employed to obtain total RNA from different tissues in L. davidii var. unicolor. A Nano drop spectrophotometer and 1% agarose gel electrophoresis were used to detect the RNA quality and integrity. Compared with TRIzol, Kit and CTAB methods, the modified TRIzol method obtained higher RNA concentrations from different tissues and the A260/A280 ratios of RNA samples were ranged from 1.97 to 2.27. Thus, the modified TRIzol method was shown to be the most effective RNA extraction protocol in acquiring RNA with high concentrations. Furthermore, the RNA samples isolated by the modified TRIzol and Kit methods were intact, whereas different degrees of degradation happened within RNA samples isolated by the TRIzol and CTAB methods. In addition, the modified TRIzol method could also isolate high-quality RNA from other edible lily bulbs. Taken together, the modified TRIzol method is an efficient method for total RNA isolation from L. davidii var. unicolor.

Indexed as

CetrimoniumGuanidinesLiliumPhenolsPlant RootsPolyphenolsRNA, PlantCetrimoniumGuanidinesPhenolsPolyphenolsRNA, Planttrizol

Identifiers

PMID35181714
PMCPMC8857280

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.