Evidence map›Paper›PMID 35179962›Full record

SynthesisScience advances2022

The histone demethylase PHF8 regulates TGFβ signaling and promotes melanoma metastasis.

Rana S Moubarak, Ana de Pablos-Aragoneses, Vanessa Ortiz-Barahona, Yixiao Gong, Michael Gowen, Igor Dolgalev, Sorin A A Shadaloey, Diana Argibay, Alcida Karz, Richard Von Itter and 6 more

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in Science advances, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. The Roles of H3K9me3 Writers, Readers, and Erasers in Cancer Immunotherapy.International journal of molecular sciences · 2024
    Review
  7. Review
  8. Review
  9. Article
  10. Dormancy of cutaneous melanoma.Cancer cell international · 2024
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
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  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Rana S MoubarakDepartment of Pathology, NYU School of Medicine, New York, NY 10016, USA.ORCID 0000-0003-2096-1258
Ana de Pablos-AragonesesDepartment of Pathology, NYU School of Medicine, New York, NY 10016, USA.ORCID 0000-0001-9028-0576
Vanessa Ortiz-BarahonaDepartment of Pathology, NYU School of Medicine, New York, NY 10016, USA.ORCID 0000-0002-0123-2642
Yixiao GongApplied Bioinformatics Laboratories, NYU School of Medicine, NY 10016, USA.ORCID 0000-0002-3462-9734
Michael GowenNYU School of Medicine Institute for Computational Medicine, New York, NY 10016, USA.ORCID 0000-0002-8629-020X
Igor DolgalevDepartment of Pathology, NYU School of Medicine, New York, NY 10016, USA.ORCID 0000-0003-4451-126X
Sorin A A ShadaloeyDepartment of Pathology, NYU School of Medicine, New York, NY 10016, USA.ORCID 0000-0002-7814-0762
Diana ArgibayDepartment of Pathology, NYU School of Medicine, New York, NY 10016, USA.ORCID 0000-0002-9469-5880
Alcida KarzDepartment of Pathology, NYU School of Medicine, New York, NY 10016, USA.ORCID 0000-0001-5839-3423
Richard Von ItterDepartment of Pathology, NYU School of Medicine, New York, NY 10016, USA.ORCID 0000-0001-8081-8328
Eleazar Carmelo Vega-Sáenz de MieraNYU School of Medicine Institute for Computational Medicine, New York, NY 10016, USA.ORCID 0000-0001-8443-1286
Elena SokolovaDepartment of Pathology, NYU School of Medicine, New York, NY 10016, USA.
Farbod DarvishianDepartment of Pathology, NYU School of Medicine, New York, NY 10016, USA.
Aristotelis TsirigosDepartment of Pathology, NYU School of Medicine, New York, NY 10016, USA.ORCID 0000-0002-7512-8477
Iman OsmanInterdisciplinary Melanoma Cooperative Group, NYU Cancer Institute, New York, NY 10016, USA.ORCID 0000-0002-1472-1971
Eva HernandoDepartment of Pathology, NYU School of Medicine, New York, NY 10016, USA.ORCID 0000-0003-2096-1258
Eastern Cooperative Oncology Group · USNew York University · US

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ANIRBAN MAITRA · 1985 to 2026
$83.1M
Project 4P50CA225450 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KIRCHHOFF, TOMAS · 2019 to 2025
$12.5M
Sex Differences in Methylome Alterations and Mutational Burden in Early Stage MelanomaP01CA206980 · NCI · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI BERWICK, MARIANNE, THOMAS, NANCY E. · 2017 to 2022
$10.1M
Role of circular RNA CDR1as in melanomaR01CA243446 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI HERNANDO, EVA · 2020 to 2024
$2.7M
Post-translational control of cancer cell stress response and metastasisR01CA202027 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI AIFANTIS, IANNIS, HERNANDO, EVA · 2016 to 2020
$2.3M
NCI NIH HHS P01 CA206980NCI NIH HHS P30 CA016087NCI NIH HHS P50 CA225450NCI NIH HHS R01 CA202027NCI NIH HHS R01 CA243446
6 · The paper itself

Abstract

The contribution of epigenetic dysregulation to metastasis remains understudied. Through a meta-analysis of gene expression datasets followed by a mini-screen, we identified Plant Homeodomain Finger protein 8 (PHF8), a histone demethylase of the Jumonji C protein family, as a previously unidentified prometastatic gene in melanoma. Loss- and gain-of-function approaches demonstrate that PHF8 promotes cell invasion without affecting proliferation in vitro and increases dissemination but not subcutaneous tumor growth in vivo, thus supporting its specific contribution to the acquisition of metastatic potential. PHF8 requires its histone demethylase activity to enhance melanoma cell invasion. Transcriptomic and epigenomic analyses revealed that PHF8 orchestrates a molecular program that directly controls the TGFβ signaling pathway and, as a consequence, melanoma invasion and metastasis. Our findings bring a mechanistic understanding of epigenetic regulation of metastatic fitness in cancer, which may pave the way for improved therapeutic interventions.

Indexed as

Histone DemethylasesMelanomaCell ProliferationEpigenesis, GeneticHomeodomain ProteinsHumansTranscription FactorsTransforming Growth Factor betaHistone DemethylasesHomeodomain ProteinsPHF8 protein, humanTranscription FactorsTransforming Growth Factor beta

Identifiers

PMID35179962
PMCPMC8856617
OpenAlexW4212929803

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.