Evidence map›Paper›PMID 35179578›Full record

ArticleGenome biology and evolution2022

Reconstruction of Nitrogenase Predecessors Suggests Origin from Maturase-Like Proteins.

Amanda K Garcia, Bryan Kolaczkowski, Betül Kaçar

Abstract read
In one paragraph

Article in Genome biology and evolution, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Iron-molybdenum cofactor synthesis by a thermophilic nitrogenase devoid of the scaffold NifEN.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Exploring the influence of atmospheric COApplied and environmental microbiology · 2024
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Early divergence of translation initiation and elongation factors.Protein science : a publication of the Protein Society · 2022
    Article
  18. Article
  19. Microbial NGeobiology
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Amanda K GarciaDepartment of Bacteriology, University of Wisconsin-Madison, Madison, Wisconsin, USA.ORCID 0000-0002-1936-2568
Bryan KolaczkowskiDepartment of Microbiology and Cell Science, University of Florida, Gainesville, Florida, USA.ORCID 0000-0002-9490-6019
Betül KaçarDepartment of Bacteriology, University of Wisconsin-Madison, Madison, Wisconsin, USA.

Funding

Shared Services Center NASA 80NSSC18K1617
6 · The paper itself

Abstract

The evolution of biological nitrogen fixation, uniquely catalyzed by nitrogenase enzymes, has been one of the most consequential biogeochemical innovations over life's history. Though understanding the early evolution of nitrogen fixation has been a longstanding goal from molecular, biogeochemical, and planetary perspectives, its origins remain enigmatic. In this study, we reconstructed the evolutionary histories of nitrogenases, as well as homologous maturase proteins that participate in the assembly of the nitrogenase active-site cofactor but are not able to fix nitrogen. We combined phylogenetic and ancestral sequence inference with an analysis of predicted functionally divergent sites between nitrogenases and maturases to infer the nitrogen-fixing capabilities of their shared ancestors. Our results provide phylogenetic constraints to the emergence of nitrogen fixation and are consistent with a model wherein nitrogenases emerged from maturase-like predecessors. Though the precise functional role of such a predecessor protein remains speculative, our results highlight evolutionary contingency as a significant factor shaping the evolution of a biogeochemically essential enzyme.

Indexed as

NitrogenaseNitrogen FixationCatalytic DomainNitrogenPhylogenyNitrogenNitrogenaseancestral sequence reconstructionearly lifehistorical contingencymaturasenitrogenasenitrogen fixation

Identifiers

PMID35179578
PMCPMC8890362

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.