Evidence map›Paper›PMID 35178612›Full record

ArticlePlant cell reports2022

Physicochemical characterization of the recombinant lectin scytovirin and microbicidal activity of the SD1 domain produced in rice against HIV-1.

Victoria Armario-Najera, Amaya Blanco-Perera, Shilpa R Shenoy, Yi Sun, Silvia Marfil, Jordana Muñoz-Basagoiti, Daniel Perez-Zsolt, Julià Blanco, Nuria Izquierdo-Useros, Teresa Capell and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Plant cell reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 2 countries.

Victoria Armario-Najera *Department of Plant Production and Forestry Science, School of Agrifood and Forestry Science and Engineering, University of Lleida-Agrotecnio CERCA Center, 25198, Lleida, Spain.ORCID http://orcid.org/0000-0002-8756-3396
Amaya Blanco-Perera *Department of Plant Production and Forestry Science, School of Agrifood and Forestry Science and Engineering, University of Lleida-Agrotecnio CERCA Center, 25198, Lleida, Spain.
Shilpa R ShenoyFrederick National Laboratory for Cancer Research, Leidos Biomedical Research Inc., Frederick, MD, 21702, USA.
Yi SunDepartment of Plant Production and Forestry Science, School of Agrifood and Forestry Science and Engineering, University of Lleida-Agrotecnio CERCA Center, 25198, Lleida, Spain.
Silvia MarfilIrsiCaixa AIDS Research Institute, 08916, Badalona, Spain.
Jordana Muñoz-BasagoitiIrsiCaixa AIDS Research Institute, 08916, Badalona, Spain.
Daniel Perez-ZsoltIrsiCaixa AIDS Research Institute, 08916, Badalona, Spain.
Julià BlancoIrsiCaixa AIDS Research Institute, 08916, Badalona, Spain.
Nuria Izquierdo-UserosIrsiCaixa AIDS Research Institute, 08916, Badalona, Spain.
Teresa CapellDepartment of Plant Production and Forestry Science, School of Agrifood and Forestry Science and Engineering, University of Lleida-Agrotecnio CERCA Center, 25198, Lleida, Spain.
Barry R O'KeefeMolecular Targets Program, Center for Cancer Research, National Cancer Institute, NIH, Frederick, MD, USA. okeefeba@mail.nih.gov.
Paul ChristouDepartment of Plant Production and Forestry Science, School of Agrifood and Forestry Science and Engineering, University of Lleida-Agrotecnio CERCA Center, 25198, Lleida, Spain. paul.christou@udl.cat.
IrsiCaixa · ESUniversitat de Lleida · ESInstitució Catalana de Recerca i Estudis Avançats · ESLeidos (United States) · USTarget (United States) · USUniversitat de Vic - Universitat Central de Catalunya · ES

Funding

Isolation of bioactive proteins from natural product extractsZIABC011472 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI OKEEFE, BARRY · 2012 to 2025
$7.8M
NCI NIH HHS HHSN261201800001C
6 · The paper itself

Abstract

key messageRice-produced SD1 retains its physicochemical properties and provides efficient pre-exposure HIV-1 prophylaxis against infection in vitro. Scytovirin (SVN) is an HIV-neutralizing lectin that features two structural domains (SD1 and SD2) that bind to HIV-1 envelope glycoproteins. We expressed SD1 in rice seeds as a potential large-scale production platform and confirmed that rice-derived SD1 binds the HIV-1 envelope glycoprotein gp120 in vitro. We analyzed the thermodynamic properties of SD1 compared to full-size SVN (produced in E. coli) by isothermal titration and differential scanning calorimetry to characterize the specific interactions between SVN/SD1 and gp120 as well as to high-mannose oligosaccharides. SVN bound with moderate affinity (K

Indexed as

HIV-1OryzaBacterial ProteinsCarrier ProteinsEscherichia coliHIV Envelope Protein gp120LectinsMembrane ProteinsSyndactylyBacterial ProteinsCarrier ProteinsHIV Envelope Protein gp120LectinsMembrane ProteinsAntiviral lectinsHIVScytovirinTransgenic plant

Identifiers

PMID35178612
PMCPMC9034974
OpenAlexW4213342153

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.