Evidence map›Paper›PMID 35178306›Full record

ArticlePeerJ2022

Transcriptome analysis reveals the potential biological function of FSCN1 in HeLa cervical cancer cells.

Fengqin Guo, Yanliang Liu, Yanxiang Cheng, Qifan Zhang, Weili Quan, Yaxun Wei, Li Hong

Open access · goldAbstract read
In one paragraph

Article in PeerJ, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Fengqin GuoDepartment of Obstetrics & Gynecology, Renmin Hospital of Wuhan University, Wuhan, Hubei Province, China.
Yanliang LiuDepartment of Gastrointestinal Surgery II, Renmin Hospital of Wuhan University, Wuhan, Hubei Province, China.
Yanxiang ChengDepartment of Obstetrics & Gynecology, Renmin Hospital of Wuhan University, Wuhan, Hubei Province, China.
Qifan ZhangDepartment of Obstetrics & Gynecology, Renmin Hospital of Wuhan University, Wuhan, Hubei Province, China.
Weili QuanABLife BioBigData Institute, Wuhan, Hubei Province, China.
Yaxun WeiCenter for Genome Analysis, ABLife Inc., Wuhan, Hubei Province, China.
Li HongDepartment of Obstetrics & Gynecology, Renmin Hospital of Wuhan University, Wuhan, Hubei Province, China.
Wuhan University · CNRenmin Hospital of Wuhan University · CNWuhan Institute of Bioengineering · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fascin actin-bundling protein 1 (FSCN1), an actin-bundling protein associated with cell migration and invasion, is highly expressed in various tumor tissues. FSCN1 has also been reported to be a marker of increased invasive potential in cervical cancers. However, the functions of FSCN1 are still not fully understood in cervical cancers. Here, the gene expression profile of HeLa cells transfected with FSCN1 shRNA (shFSCN1) was compared with that of cells transfected with empty vector (shCtrl). The results showed that shFSCN1 extensively affected the transcription level of 5,043 genes in HeLa cells. In particular, Gene Ontology (GO) analysis showed that a large number of upregulated genes were annotated with terms including transcription regulation and DNA binding. The downregulated genes were enriched in some cancer pathways, including angiogenesis and cell adhesion. qPCR validation confirmed that FSCN1 knockdown significantly affected the expression of selected genes in HeLa cells either negatively or positively. Expression analysis in TCGA (The Cancer Genome Atlas) revealed that FSCN1 had negative correlations with several transcription factors and a positive correlation with an angiogenic factor (angiopoietin like 4,

Indexed as

MicroRNAsUterine Cervical NeoplasmsActinsAngiogenesis Inducing AgentsCarrier ProteinsFemaleGene Expression ProfilingHeLa CellsHumansMicrofilament ProteinsActinsAngiogenesis Inducing AgentsCarrier ProteinsFSCN1 protein, humanMicrofilament ProteinsMicroRNAsFSCN1Gene expression profileGene knockdownRNA-seqTranscription regulation

Identifiers

PMID35178306
PMCPMC8817631
OpenAlexW4210326282

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.