Evidence map›Paper›PMID 35177775›Full record

ArticleCommunications biology2022

Structure of the stress-related LHCSR1 complex determined by an integrated computational strategy.

Ingrid Guarnetti Prandi, Vladislav Sláma, Cristina Pecorilla, Lorenzo Cupellini, Benedetta Mennucci

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 15 citations in OpenAlex.

  1. LHCSR1 Functions as a Dimmer Switch for Light Harvesting.The journal of physical chemistry letters · 2026
    Article
  2. Article
  3. Article
  4. Machine Learning Exciton Hamiltonians in Light-Harvesting Complexes.Journal of chemical theory and computation · 2023
    Article
  5. LHC-like Proteins: The Guardians of Photosynthesis.International journal of molecular sciences · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ingrid Guarnetti Prandi *Department of Chemistry and Industrial Chemistry, University of Pisa, 56124, Pisa, Italy.
Vladislav Sláma *Department of Chemistry and Industrial Chemistry, University of Pisa, 56124, Pisa, Italy.
Cristina PecorillaDepartment of Chemistry and Industrial Chemistry, University of Pisa, 56124, Pisa, Italy.ORCID http://orcid.org/0000-0003-2729-3053
Lorenzo CupelliniDepartment of Chemistry and Industrial Chemistry, University of Pisa, 56124, Pisa, Italy. lorenzo.cupellini@unipi.it.ORCID http://orcid.org/0000-0003-0848-2908
Benedetta MennucciDepartment of Chemistry and Industrial Chemistry, University of Pisa, 56124, Pisa, Italy. benedetta.mennucci@unipi.it.ORCID http://orcid.org/0000-0002-4394-0129
University of Pisa · IT

Funding

EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) 786714
6 · The paper itself

Abstract

Light-harvesting complexes (LHCs) are pigment-protein complexes whose main function is to capture sunlight and transfer the energy to reaction centers of photosystems. In response to varying light conditions, LH complexes also play photoregulation and photoprotection roles. In algae and mosses, a sub-family of LHCs, light-harvesting complex stress-related (LHCSR), is responsible for photoprotective quenching. Despite their functional and evolutionary importance, no direct structural information on LHCSRs is available that can explain their unique properties. In this work, we propose a structural model of LHCSR1 from the moss P. patens, obtained through an integrated computational strategy that combines homology modeling, molecular dynamics, and multiscale quantum chemical calculations. The model is validated by reproducing the spectral properties of LHCSR1. Our model reveals the structural specificity of LHCSR1, as compared with the CP29 LH complex, and poses the basis for understanding photoprotective quenching in mosses.

Indexed as

Light-Harvesting Protein ComplexesStress, PhysiologicalAmino Acid SequenceBryopsidaComputer SimulationGene Expression Regulation, PlantPigments, BiologicalProtein ConformationLight-Harvesting Protein ComplexesPigments, Biological

Identifiers

PMID35177775
PMCPMC8854571
OpenAlexW4220783636

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.