Evidence map›Paper›PMID 35177601›Full record

ArticleNature communications2022

Recurrent chromosome reshuffling and the evolution of neo-sex chromosomes in parrots.

Zhen Huang, Ivanete De O Furo, Jing Liu, Valentina Peona, Anderson J B Gomes, Wan Cen, Hao Huang, Yanding Zhang, Duo Chen, Ting Xue and 8 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
14.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 85 citations in OpenAlex.

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  16. Science advances · 2025
    Article
  17. Article
  18. Genomic origins and evolution of neo-sex chromosomes in Pacific Island birds.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  19. Widespread variation inbioRxiv : the preprint server for biology · 2025
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 9 institutions in 5 countries.

Zhen HuangFujian Key Laboratory of Developmental and Neural Biology & Southern Center for Biomedical Research, College of Life Sciences, Fujian Normal University, Fuzhou, Fujian, China.ORCID 0000-0002-8908-0355
Ivanete De O FuroUniversidade Federal Rural da Amazônia (UFRA) Laboratório de Reprodução Animal (LABRAC), Parauapebas, PA, Brazil.
Jing LiuDepartment of Neurosciences and Developmental Biology, University of Vienna, Vienna, Austria.ORCID 0000-0003-0420-1769
Valentina PeonaDepartment of Organismal Biology, Systematic Biology, Science for Life Laboratories, Uppsala University, Uppsala, Sweden.ORCID 0000-0001-5119-1837
Anderson J B GomesInstituto Federal do Pará, Abaetetuba, Pará, Brazil.ORCID 0000-0002-3887-3283
Wan CenFujian Key Laboratory of Special Marine Bio-resources Sustainable Utilization, Fuzhou, Fujian, China.
Hao HuangFujian Key Laboratory of Developmental and Neural Biology & Southern Center for Biomedical Research, College of Life Sciences, Fujian Normal University, Fuzhou, Fujian, China.
Yanding ZhangFujian Key Laboratory of Developmental and Neural Biology & Southern Center for Biomedical Research, College of Life Sciences, Fujian Normal University, Fuzhou, Fujian, China.
Duo ChenFujian Key Laboratory of Special Marine Bio-resources Sustainable Utilization, Fuzhou, Fujian, China.
Ting XueFujian Key Laboratory of Special Marine Bio-resources Sustainable Utilization, Fuzhou, Fujian, China.ORCID 0000-0003-0727-9158
Qiujin ZhangFujian Key Laboratory of Developmental and Neural Biology & Southern Center for Biomedical Research, College of Life Sciences, Fujian Normal University, Fuzhou, Fujian, China.
Zhicao YueDepartment of Cell Biology and Medical Genetics; International Cancer Center; and Guangdong Key Laboratory for Genome Stability and Disease Prevention, Shenzhen University School of Medicine, Guangdong, China.
Quanxi WangFujian Key Laboratory of Traditional Chinese Veterinary Medicine and Animal Health (Fujian Agriculture and Forestry University), Fuzhou, Fujian, China.
Lingyu YuAnnoroad Gene Technology Co., Ltd, Beijing, China.
Youling ChenFujian Key Laboratory of Developmental and Neural Biology & Southern Center for Biomedical Research, College of Life Sciences, Fujian Normal University, Fuzhou, Fujian, China. ylchen@fjnu.edu.cn.ORCID 0000-0002-3118-9550
Alexander SuhDepartment of Organismal Biology, Systematic Biology, Science for Life Laboratories, Uppsala University, Uppsala, Sweden.ORCID 0000-0002-8979-9992
Edivaldo H C de OliveiraPrograma de Pós-graduação em Genética e Biologia Molecular, PPGBM, Universidade Federal do Pará, Belém, Pará, Brazil.ORCID 0000-0001-6315-3352
Luohao XuDepartment of Neurosciences and Developmental Biology, University of Vienna, Vienna, Austria. luohao.xu@univie.ac.at.ORCID 0000-0002-3714-8047
Fujian Normal University · CNUniversity of Vienna · ATFujian Agriculture and Forestry University · CNInstituto Evandro Chagas · BRInstituto Federal de Educação, Ciência e Tecnologia do Pará · BRShenzhen University · CNUniversidade Federal Rural da Amazônia · BRUniversity of East Anglia · GBUppsala University · SE

Funding

Austrian Science Fund FWF J 4477
6 · The paper itself

Abstract

The karyotype of most birds has remained considerably stable during more than 100 million years' evolution, except for some groups, such as parrots. The evolutionary processes and underlying genetic mechanism of chromosomal rearrangements in parrots, however, are poorly understood. Here, using chromosome-level assemblies of four parrot genomes, we uncover frequent chromosome fusions and fissions, with most of them occurring independently among lineages. The increased activities of chromosomal rearrangements in parrots are likely associated with parrot-specific loss of two genes, ALC1 and PARP3, that have known functions in the repair of double-strand breaks and maintenance of genome stability. We further find that the fusion of the ZW sex chromosomes and chromosome 11 has created a pair of neo-sex chromosomes in the ancestor of parrots, and the chromosome 25 has been further added to the sex chromosomes in monk parakeet. Together, the combination of our genomic and cytogenetic analyses characterizes the complex evolutionary history of chromosomal rearrangements and sex chromosomes in parrots.

Indexed as

Evolution, MolecularAnimalsChromosome PaintingDNA Breaks, Double-StrandedDNA HelicasesFemaleGene RearrangementGenomic InstabilityKaryotypeKaryotypingParrotsPhylogenyPoly(ADP-ribose) PolymerasesSex ChromosomesSyntenyDNA HelicasesPoly(ADP-ribose) Polymerases

Identifiers

PMID35177601
PMCPMC8854603
OpenAlexW4220925049

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.