Evidence map›Paper›PMID 35177536›Full record

ArticleGenes & development2022

RBBP6 activates the pre-mRNA 3' end processing machinery in humans.

Vytaute Boreikaite, Thomas S Elliott, Jason W Chin, Lori A Passmore

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 56 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Vytaute BoreikaiteMedical Research Council Laboratory of Molecular Biology, Cambridge CB2 0QH, United Kingdom.ORCID 0000-0003-2817-3125
Thomas S ElliottMedical Research Council Laboratory of Molecular Biology, Cambridge CB2 0QH, United Kingdom.
Jason W ChinMedical Research Council Laboratory of Molecular Biology, Cambridge CB2 0QH, United Kingdom.
Lori A PassmoreMedical Research Council Laboratory of Molecular Biology, Cambridge CB2 0QH, United Kingdom.ORCID 0000-0003-1815-3710
MRC Laboratory of Molecular Biology · GB

Funding

Medical Research Council MC_U105181009Medical Research Council MC_U105192715Medical Research Council MC_UP_A024_1008
6 · The paper itself

Abstract

3' end processing of most human mRNAs is carried out by the cleavage and polyadenylation specificity factor (CPSF; CPF in yeast). Endonucleolytic cleavage of the nascent pre-mRNA defines the 3' end of the mature transcript, which is important for mRNA localization, translation, and stability. Cleavage must therefore be tightly regulated. Here, we reconstituted specific and efficient 3' endonuclease activity of human CPSF with purified proteins. This required the seven-subunit CPSF as well as three additional protein factors: cleavage stimulatory factor (CStF), cleavage factor IIm (CFIIm), and, importantly, the multidomain protein RBBP6. Unlike its yeast homolog Mpe1, which is a stable subunit of CPF, RBBP6 does not copurify with CPSF and is recruited in an RNA-dependent manner. Sequence and mutational analyses suggest that RBBP6 interacts with the WDR33 and CPSF73 subunits of CPSF. Thus, it is likely that the role of RBBP6 is conserved from yeast to humans. Overall, our data are consistent with CPSF endonuclease activation and site-specific pre-mRNA cleavage being highly controlled to maintain fidelity in mRNA processing.

Indexed as

DNA-Binding ProteinsRNA PrecursorsUbiquitin-Protein LigasesCleavage And Polyadenylation Specificity FactorEndonucleasesHumansmRNA Cleavage and Polyadenylation FactorsRNA, MessengerRNA Processing, Post-TranscriptionalSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCleavage And Polyadenylation Specificity FactorDNA-Binding ProteinsEndonucleasesMpe1 protein, S cerevisiaemRNA Cleavage and Polyadenylation FactorsRBBP6 protein, humanRNA, MessengerRNA PrecursorsSaccharomyces cerevisiae ProteinsUbiquitin-Protein Ligasesendonucleasegene expressionpolyadenylationRNA

Identifiers

PMID35177536
PMCPMC8887125
OpenAlexW4213158073

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.