Evidence map›Paper›PMID 35176763›Full record

ArticleCancer discovery2022

The Genomics of Colorectal Cancer in Populations with African and European Ancestry.

Parvathi A Myer, Jessica K Lee, Russell W Madison, Kith Pradhan, Justin Y Newberg, Carmen R Isasi, Samuel J Klempner, Garrett M Frampton, Jeffery S Ross, Jeffrey M Venstrom and 8 more

Open access · hybridAbstract read
In one paragraph

Article in Cancer discovery, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed, 6 pooled it
9.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 6 syntheses or guidelines pooled it, 65 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Pooled it
  6. Pooled it
  7. Trial
  8. The Landscape of Genomic and Socioeconomic Variables in Patients with Colorectal Cancer Based on Genetic Ancestry.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2026
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. SOMATIC MUTATION PROFILES IN COLORECTAL CANCERS DIFFER BY POPULATION.medRxiv : the preprint server for health sciences · 2026
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Gastro hep advances · 2026
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 2 countries.

Parvathi A Myer *Montefiore Medical Center, Albert Einstein Cancer Center, Bronx, New York.ORCID 0000-0003-1947-8795
Jessica K Lee *Foundation Medicine, Cambridge, Massachusetts.ORCID 0000-0002-4333-5092
Russell W MadisonFoundation Medicine, Cambridge, Massachusetts.ORCID 0000-0002-7838-2526
Kith PradhanAlbert Einstein College of Medicine, Bronx, New York.
Justin Y NewbergFoundation Medicine, Cambridge, Massachusetts.
Carmen R IsasiAlbert Einstein College of Medicine, Bronx, New York.
Samuel J KlempnerMassachusetts General Hospital, Boston, Massachusetts.ORCID 0000-0002-4062-0808
Garrett M FramptonFoundation Medicine, Cambridge, Massachusetts.ORCID 0000-0002-2361-2750
Jeffery S RossFoundation Medicine, Cambridge, Massachusetts.ORCID 0000-0001-8494-2596
Jeffrey M VenstromFoundation Medicine, Cambridge, Massachusetts.
Alexa B SchrockFoundation Medicine, Cambridge, Massachusetts.
Sudipto DasRoyal College of Surgeons, School of Pharmacy and Biomolecular Sciences, Dublin, Ireland.
Leonard AugenlichtAlbert Einstein College of Medicine, Bronx, New York.
Amit VermaMontefiore Medical Center, Albert Einstein Cancer Center, Bronx, New York.
John M GreallyAlbert Einstein College of Medicine, Bronx, New York.
Srilakshmi M RajAlbert Einstein College of Medicine, Bronx, New York.
Sanjay GoelMontefiore Medical Center, Albert Einstein Cancer Center, Bronx, New York.ORCID 0000-0002-2798-7568
Siraj M AliFoundation Medicine, Cambridge, Massachusetts.ORCID 0000-0001-7477-4023
Albert Einstein College of Medicine · USGlobalFoundries (United States) · USMassachusetts General Hospital · USRoyal College of Surgeons in Ireland · IESUNY Upstate Medical University · US

Funding

Paul Calabresis Career Development Award For Clinical Oncology K12CA132783 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI PEREZ-SOLER, ROMAN, VERMA, AMIT K. · 2009 to 2019
$8.2M
UNDERSTANDING CELLULAR AND TRANSCRIPTIONAL REGULATORY CHANGES IN HUMAN AGINGR01AG057422 · NIA · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI GREALLY, JOHN, LAPPALAINEN, TUULI · 2018 to 2022
$4.5M
Nutritionally Driven Sporadic Intestinal Tumors: Impact on Stem CellsR01CA229216 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI AUGENLICHT, LEONARD H · 2018 to 2022
$2.4M
A Major Nutritional Effect on Intestinal Stem Cells and TumorsR01CA214625 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI AUGENLICHT, LEONARD H · 2018 to 2022
$1.6M
NCI NIH HHS R01 CA214625NCI NIH HHS R01 CA229216NIA NIH HHS R01 AG057422NIMHD NIH HHS L60 MD011824
6 · The paper itself

Abstract

Black people have a higher incidence of colorectal cancer and worse survival rates when compared with white people. Comprehensive genomic profiling was performed in 46,140 colorectal adenocarcinoma cases. Ancestry-informative markers identified 5,301 patients of African descent (AFR) and 33,770 patients of European descent (EUR). AFR were younger, had fewer microsatellite instability-high (MSI-H) tumors, and had significantly more frequent alterations in KRAS, APC, and PIK3CA. AFR had increased frequency of KRAS mutations, specifically KRASG12D and KRASG13. There were no differences in rates of actionable kinase driver alterations (HER2, MET, NTRK, ALK, ROS1, and RET). In patients with young-onset colorectal cancer (<50 years), AFR and EUR had a similar frequency of MSI-H and tumor mutational burden-high (TMB-H) tumors, and strikingly different trends in APC mutations by age, as well as differences in MAPK pathway alterations. These findings inform treatment decisions, impact prognosis, and underscore the need for model systems representative of the diverse U.S. population. SIGNIFICANCE: KRAS (particularly KRASG12D/G13), APC, and PIK3CA were more frequently altered in AFR who had a lower frequency of MSI-H tumors. There were no differences in actionable kinase driver alterations. In young-onset colorectal cancer, both ancestries had a similar frequency of MSI-H/TMB-H tumors, but strikingly different trends in APC. See related commentary by Eng and Holowatyj, p. 1187. This article is highlighted in the In This Issue feature, p. 1171.

Indexed as

Colorectal NeoplasmsProtein-Tyrosine KinasesClass I Phosphatidylinositol 3-KinasesGenomicsHumansMicrosatellite InstabilityMutationProto-Oncogene ProteinsProto-Oncogene Proteins p21(ras)Class I Phosphatidylinositol 3-KinasesProtein-Tyrosine KinasesProto-Oncogene ProteinsProto-Oncogene Proteins p21(ras)

Identifiers

PMID35176763
PMCPMC9169495
OpenAlexW4212882240

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.