Evidence map›Paper›PMID 35176067›Full record

ArticlePloS one2022

Isolating and cryopreserving pig skin cells for single-cell RNA sequencing study.

Li Han, Carlos P Jara, Ou Wang, Yu Shi, Xinran Wu, Sandra Thibivilliers, Rafał K Wóycicki, Mark A Carlson, William H Velander, Eliana P Araújo and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
  3. Selective epithelial expression of KRASScientific reports · 2025
    Article
  4. Article
  5. Single-Cell RNA Sequencing Reveals the Cellular Landscape ofInternational journal of molecular sciences · 2024
    Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Li HanSchool of Biological Science, University of Nebraska, Lincoln, Nebraska, United States of America.
Carlos P JaraNursing School, University of Campinas, Campinas SP, Brazil.
Ou WangDepartment of Chemical and Biomolecular Engineering, University of Nebraska, Lincoln, Nebraska, United States of America.
Yu ShiSchool of Biological Science, University of Nebraska, Lincoln, Nebraska, United States of America.ORCID 0000-0003-1272-8392
Xinran WuDepartment of Biomedical Engineering, Pennsylvania State University, University Park, Pennsylvania, United States of America.
Sandra ThibivilliersDepartment of Agronomy and Horticulture, Center for Plant Science Innovation, University of Nebraska, Lincoln, Nebraska, United States of America.
Rafał K WóycickiDepartment of Agronomy and Horticulture, Center for Plant Science Innovation, University of Nebraska, Lincoln, Nebraska, United States of America.
Mark A CarlsonMary and Dick Holland Regenerative Medicine Program, University of Nebraska Medical Center, Omaha, Nebraska, United States of America.
William H VelanderDepartment of Chemical and Biomolecular Engineering, University of Nebraska, Lincoln, Nebraska, United States of America.ORCID 0000-0002-8020-5174
Eliana P AraújoNursing School, University of Campinas, Campinas SP, Brazil.
Marc LibaultDepartment of Agronomy and Horticulture, Center for Plant Science Innovation, University of Nebraska, Lincoln, Nebraska, United States of America.
Chi ZhangSchool of Biological Science, University of Nebraska, Lincoln, Nebraska, United States of America.ORCID 0000-0002-1827-8137
Yuguo LeiDepartment of Chemical and Biomolecular Engineering, University of Nebraska, Lincoln, Nebraska, United States of America.ORCID 0000-0002-7682-6912
University of Nebraska–Lincoln · USUniversidade Estadual de Campinas (UNICAMP) · BRPennsylvania State University · USVA Nebraska Western Iowa Health Care System · US

Funding

A Single Conical Tube Device for Precision CAR-T Cells ManufacturingR33CA235326 · NCI · UNIVERSITY OF NEBRASKA LINCOLN · PI LEI, YUGUO · 2019 to 2021
$1.1M
NCI NIH HHS R33 CA235326
6 · The paper itself

Abstract

The pig skin architecture and physiology are similar to those of humans. Thus, the pig model is very valuable for studying skin biology and testing therapeutics. The single-cell RNA sequencing (scRNA-seq) technology allows quantitatively analyzing cell types, compositions, states, signaling, and receptor-ligand interactome at single-cell resolution and at high throughput. scRNA-seq has been used to study mouse and human skins. However, studying pig skin with scRNA-seq is still rare. A critical step for successful scRNA-seq is to obtain high-quality single cells from the pig skin tissue. Here we report a robust method for isolating and cryopreserving pig skin single cells for scRNA-seq. We showed that pig skin could be efficiently dissociated into single cells with high cell viability using the Miltenyi Human Whole Skin Dissociation kit and the Miltenyi gentleMACS Dissociator. Furthermore, the obtained single cells could be cryopreserved using 90% FBS + 10% DMSO without causing additional cell death, cell aggregation, or changes in gene expression profiles. Using the developed protocol, we were able to identify all the major skin cell types. The protocol and results from this study are valuable for the skin research scientific community.

Indexed as

TranscriptomeAnimalsCryopreservationExome SequencingGene Expression ProfilingSingle-Cell AnalysisSkinSpecimen HandlingSwine

Identifiers

PMID35176067
PMCPMC8853494
OpenAlexW4225863717

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.