Evidence map›Paper›PMID 35175606›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2022

Negative-Selection Enrichment of Circulating Tumor Cells from Peripheral Blood Using the Microfluidic CTC-iChip.

Risa Burr, Jon F Edd, Brian Chirn, Avanish Mishra, Daniel A Haber, Mehmet Toner, Shyamala Maheswaran

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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
9.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Liquid Biopsy in the Clinical Management of Cancers.International journal of molecular sciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Risa BurrMassachusetts General Hospital Center for Cancer Research, Harvard Medical School, Charlestown, MA, USA.
Jon F EddCenter for Engineering in Medicine, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA.
Brian ChirnMassachusetts General Hospital Center for Cancer Research, Harvard Medical School, Charlestown, MA, USA.
Avanish MishraCenter for Engineering in Medicine, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA.
Daniel A HaberMassachusetts General Hospital Center for Cancer Research, Harvard Medical School, Charlestown, MA, USA.
Mehmet TonerCenter for Engineering in Medicine, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA.
Shyamala MaheswaranMassachusetts General Hospital Center for Cancer Research, Harvard Medical School, Charlestown, MA, USA. Maheswaran@helix.mgh.harvard.edu.
Harvard University · USHoward Hughes Medical Institute · USMassachusetts General Hospital · USShriners Hospitals for Children - Boston · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ability to isolate and analyze rare circulating tumor cells (CTCs) holds the potential to increase our understanding of cancer evolution and allows monitoring of disease and therapeutic responses through a relatively non-invasive blood-based biopsy. While many methods have been described to isolate CTCs from the blood, the vast majority rely on size-based sorting or positive selection of CTCs based on surface markers, which introduces bias into the downstream product by making assumptions about these heterogenous cells. Here we describe a negative-selection protocol for enrichment of CTCs through removal of blood components including red blood cells, platelets, and white blood cells. This procedure results in a product that is amenable to downstream single-cell analytics including RNA-Seq, ATAC-Seq and DNA methylation, droplet digital PCR (ddPCR) for tumor specific transcripts, staining and extensive image analysis, and ex vivo culture of patient-derived CTCs.

Indexed as

Neoplastic Cells, CirculatingCell CountCell Line, TumorCell SeparationHumansMicrofluidicsBlood-based biopsyCirculating tumor celliChipMetastasisMicrofluidicsNegative selection

Identifiers

PMID35175606
OpenAlexW4213108346

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.