Evidence map›Paper›PMID 35175123›Full record

ArticleMicrobiology resource announcements2022

Alphaflexivirus Genomes in Stony Coral Tissue Loss Disease-Affected, Disease-Exposed, and Disease-Unexposed Coral Colonies in the U.S. Virgin Islands.

A J Veglia, K Beavers, E W Van Buren, S S Meiling, E M Muller, T B Smith, D M Holstein, A Apprill, M E Brandt, L D Mydlarz and 1 more

Abstract read
In one paragraph

Article in Microbiology resource announcements, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

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  8. Novel metagenomics analysis of stony coral tissue loss disease.bioRxiv : the preprint server for biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

A J VegliaDepartment of BioSciences, Rice University, Houston, Texas, USA.ORCID 0000-0003-3118-5127
K BeaversDepartment of Biology, University of Texas, Arlington, Texas, USA.
E W Van BurenDepartment of Biology, University of Texas, Arlington, Texas, USA.
S S MeilingCenter for Marine and Environmental Studies, University of the Virgin Islands, St. Thomas, Virgin Islands, USA.
E M MullerMote Marine Laboratory, Sarasota, Florida, USA.
T B SmithCenter for Marine and Environmental Studies, University of the Virgin Islands, St. Thomas, Virgin Islands, USA.
D M HolsteinDepartment of Oceanography and Coastal Sciences, Louisiana State University, Baton Rouge, Louisiana, USA.
A ApprillWoods Hole Oceanographic Institution, Woods Hole, Massachusetts, USA.ORCID 0000-0002-4249-2977
M E BrandtCenter for Marine and Environmental Studies, University of the Virgin Islands, St. Thomas, Virgin Islands, USA.
L D MydlarzDepartment of Biology, University of Texas, Arlington, Texas, USA.
A M S CorreaDepartment of BioSciences, Rice University, Houston, Texas, USA.ORCID 0000-0003-0137-5042

Funding

National Science Foundation (NSF) 19228771National Science Foundation (NSF) 1927277National Science Foundation (NSF) 1928609National Science Foundation (NSF) 1928753National Science Foundation (NSF) 1928761National Science Foundation (NSF) 1928817
6 · The paper itself

Abstract

Stony coral tissue loss disease (SCTLD) is decimating Caribbean corals. Here, through the metatranscriptomic assembly and annotation of two alphaflexivirus-like strains, we provide genomic evidence of filamentous viruses in SCTLD-affected, -exposed, and -unexposed coral colonies. These data will assist in clarifying the roles of viruses in SCTLD.

Identifiers

PMID35175123
PMCPMC8852308

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.