Evidence map›Paper›PMID 35174610›Full record

ArticleJournal of cellular and molecular medicine2022

Transcriptomic profile investigations highlight a putative role for NUDT16 in sepsis.

Susie Shih Yin Huang, Darawan Rinchai, Mohammed Toufiq, Basirudeen Syed Ahamed Kabeer, Jessica Roelands, Wouter Hendrickx, Sabri Boughorbel, Davide Bedognetti, Nicholas Van Panhuys, Damien Chaussabel and 1 more

Open access · goldAbstract read
In one paragraph

Article in Journal of cellular and molecular medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Susie Shih Yin HuangDivision of Pediatric Cardiothoracic Surgery, Department of Surgery, Washington University School of Medicine, St Louis, Missouri, USA.
Darawan RinchaiSidra Medicine, Doha, Qatar.
Mohammed ToufiqSidra Medicine, Doha, Qatar.
Basirudeen Syed Ahamed KabeerSidra Medicine, Doha, Qatar.
Jessica RoelandsSidra Medicine, Doha, Qatar.
Wouter HendrickxSidra Medicine, Doha, Qatar.
Sabri BoughorbelSidra Medicine, Doha, Qatar.
Davide BedognettiSidra Medicine, Doha, Qatar.
Nicholas Van PanhuysSidra Medicine, Doha, Qatar.
Damien ChaussabelSidra Medicine, Doha, Qatar.
Mathieu GarandDivision of Pediatric Cardiothoracic Surgery, Department of Surgery, Washington University School of Medicine, St Louis, Missouri, USA.ORCID 0000-0003-4243-853X
Washington University in St. Louis · USHamad bin Khalifa University · QA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sepsis is an aberrant systemic inflammatory response mediated by the acute activation of the innate immune system. Neutrophils are important contributors to the innate immune response that controls the infection, but harbour the risk of collateral tissue damage such as thrombosis and organ dysfunction. A better understanding of the modulations of cellular processes in neutrophils and other blood cells during sepsis is needed and can be initiated via transcriptomic profile investigations. To that point, the growing repertoire of publicly accessible transcriptomic datasets serves as a valuable resource for discovering and/or assessing the robustness of biomarkers. We employed systematic literature mining, reductionist approach to gene expression profile and empirical in vitro work to highlight the role of a Nudix hydrolase family member, NUDT16, in sepsis. The relevance and implication of the expression of NUDT16 under septic conditions and the putative functional roles of this enzyme are discussed.

Indexed as

SepsisTranscriptomeHumansPyrophosphatasesNudt16 protein, humanPyrophosphatasesADP-ribosylationgene expressionmRNA decappingnudix hydrolasenudix hydrolase 16 (NUDT16)reductionist approachsepsis

Identifiers

PMID35174610
PMCPMC8899167
OpenAlexW4213104713

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.