Evidence map›Paper›PMID 35174425›Full record

ArticleArchives of microbiology2022

Burkholderia orbicola sp. nov., a novel species within the Burkholderia cepacia complex.

Leslie-Mariana Morales-Ruíz, Mariana Rodríguez-Cisneros, Jeniffer-Chris Kerber-Díaz, Fernando-Uriel Rojas-Rojas, J Antonio Ibarra, Paulina Estrada-de Los Santos

Abstract read
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In one paragraph

Article in Archives of microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Quorum sensing in theApplied and environmental microbiology · 2026
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  4. Isolation and Identification ofMicroorganisms · 2025
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  9. A type VI secretion system inInfection and immunity · 2024
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  10. Mutations Affecting Cellular Levels of Cobalamin (Vitamin BJournal of microbiology and biotechnology · 2024
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  11. Vaccines · 2024
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  12. Phage therapy to treat cystic fibrosisFrontiers in microbiology · 2024
    Review
  13. Review
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  17. Compilation of the Antimicrobial Compounds Produced byMolecules (Basel, Switzerland) · 2023
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  18. Genomic analyses ofFrontiers in microbiology · 2023
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  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Leslie-Mariana Morales-Ruíz *Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Prol. Plan de Ayala s/n, Col. Santo Tomás, Alcaldía Miguel Hidalgo, C.P. 11340, Mexico City, México.
Mariana Rodríguez-Cisneros *Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Prol. Plan de Ayala s/n, Col. Santo Tomás, Alcaldía Miguel Hidalgo, C.P. 11340, Mexico City, México.
Jeniffer-Chris Kerber-DíazEscuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Prol. Plan de Ayala s/n, Col. Santo Tomás, Alcaldía Miguel Hidalgo, C.P. 11340, Mexico City, México.
Fernando-Uriel Rojas-RojasLaboratorio de Ciencias AgroGenómicas, Escuela Nacional de Estudios Superiores Unidad León, Universidad Nacional Autónoma de México (ENES-León UNAM), Blvd. UNAM 2011, 37684, León, Guanajuato, México.
J Antonio IbarraEscuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Prol. Plan de Ayala s/n, Col. Santo Tomás, Alcaldía Miguel Hidalgo, C.P. 11340, Mexico City, México.
Paulina Estrada-de Los SantosEscuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Prol. Plan de Ayala s/n, Col. Santo Tomás, Alcaldía Miguel Hidalgo, C.P. 11340, Mexico City, México. pestradadelossantos@gmail.com.ORCID http://orcid.org/0000-0003-2407-0284

Funding

Secretaría de Investigación y Posgrado, Instituto Politécnico Nacional SIP20210392
6 · The paper itself

Abstract

Genome analysis of strains placed in the NCBI genome database as Burkholderia cenocepacia defined nine genomic species groups. The largest group (259 strains) corresponds to B. cenocepacia and the second largest group (58 strains) was identified as "Burkholderia servocepacia", a Burkholderia species classification which has not been validly published. The publication of "B. servocepacia" did not comply with Rule 27 and Recommendation 30 from the International Code of Nomenclature of Prokaryotes (ICNP) and have errors in the type strain name and the protologue describing the novel species. Here, we correct the position of this species by showing essential information that meets the criteria defined by ICNP. After additional analysis complying with taxonomic criteria, we propose that the invalid "B. servocepacia" be renamed as Burkholderia orbicola sp. nov. The original study proposing "B. servocepacia" was misleading, because this name derives from the Latin "servo" meaning "to protect/watch over", and the authors proposed this based on the beneficial biocontrol properties of several strains within the group. However, it is clear that "B. servocepacia" isolates are capable of opportunistic infection, and the proposed name Burkholderia orbicola sp. nov. takes into account these diverse phenotypic traits. The type strain is TAtl-371

Indexed as

BurkholderiaBurkholderia cepacia complexDNA, BacterialPhenotypePhylogenyRNA, Ribosomal, 16SSequence Analysis, DNADNA, BacterialRNA, Ribosomal, 16SBurkholderia cepacia complexBurkholderia sensu strictoOpportunistic pathogen

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.