Evidence map›Paper›PMID 35173170›Full record

ArticleNature communications2022

Brain-wide visual habituation networks in wild type and fmr1 zebrafish.

Emmanuel Marquez-Legorreta, Lena Constantin, Marielle Piber, Itia A Favre-Bulle, Michael A Taylor, Ann S Blevins, Jean Giacomotto, Dani S Bassett, Gilles C Vanwalleghem, Ethan K Scott

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
7.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Surrogate GPR139 Agonists Reverse Short-Term Startle Habituation Impairment in Larval Zebrafish.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  10. Brain-Wide Impacts of Sedation on Spontaneous Activity and Auditory Processing in Larval Zebrafish.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Article
  11. Article
  12. The visuomotor transformations underlying target-directed behavior.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Habituation learning: insights from zebrafish larvae.Frontiers in molecular neuroscience · 2025
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 4 countries.

Emmanuel Marquez-LegorretaThe Queensland Brain Institute, The University of Queensland, St Lucia, QLD, 4072, Australia.ORCID http://orcid.org/0000-0001-6729-9404
Lena ConstantinThe Queensland Brain Institute, The University of Queensland, St Lucia, QLD, 4072, Australia.ORCID http://orcid.org/0000-0003-1492-3845
Marielle PiberSchool of Medicine, Medical Sciences, and Nutrition, University of Aberdeen, Aberdeen, AB25 2ZD, UK.
Itia A Favre-BulleThe Queensland Brain Institute, The University of Queensland, St Lucia, QLD, 4072, Australia.ORCID http://orcid.org/0000-0003-3118-356X
Michael A TaylorAustralian Institute for Bioengineering and Nanotechnology, The University of Queensland, St Lucia, QLD, 4072, Australia.ORCID http://orcid.org/0000-0003-4393-7760
Ann S BlevinsDepartment of Bioengineering, University of Pennsylvania, Philadelphia, PA, 19104, USA.ORCID http://orcid.org/0000-0003-1031-5535
Jean GiacomottoThe Queensland Brain Institute, The University of Queensland, St Lucia, QLD, 4072, Australia.
Dani S BassettDepartment of Bioengineering, University of Pennsylvania, Philadelphia, PA, 19104, USA.ORCID http://orcid.org/0000-0002-6183-4493
Gilles C VanwalleghemThe Queensland Brain Institute, The University of Queensland, St Lucia, QLD, 4072, Australia. gilles.vanwalleghem@mbg.au.dk.ORCID http://orcid.org/0000-0002-6188-9582
Ethan K ScottThe Queensland Brain Institute, The University of Queensland, St Lucia, QLD, 4072, Australia. ethan.scott@uq.edu.au.ORCID http://orcid.org/0000-0003-3150-9216
The University of Queensland · AUGriffith University · AUHoward Hughes Medical Institute · USSanta Fe Institute · USUniversity of Aberdeen · GBUniversity of Pennsylvania · US

Funding

An integrated platform for studying sensory networks in the vertebrate brainRF1NS118406 · NINDS · UNIVERSITY OF QUEENSLAND · PI SCOTT, ETHAN KIME · 2020 to 2020
$1.2M
An integrated platform for studying sensory networks in the vertebrate brainR01NS118406 · NINDS · UNIVERSITY OF MELBOURNE · PI SCOTT, ETHAN KIME · 2023 to 2024
$747k
NINDS NIH HHS R01 NS118406NINDS NIH HHS RF1 NS118406
6 · The paper itself

Abstract

Habituation is a form of learning during which animals stop responding to repetitive stimuli, and deficits in habituation are characteristic of several psychiatric disorders. Due to technical challenges, the brain-wide networks mediating habituation are poorly understood. Here we report brain-wide calcium imaging during larval zebrafish habituation to repeated visual looming stimuli. We show that different functional categories of loom-sensitive neurons are located in characteristic locations throughout the brain, and that both the functional properties of their networks and the resulting behavior can be modulated by stimulus saliency and timing. Using graph theory, we identify a visual circuit that habituates minimally, a moderately habituating midbrain population proposed to mediate the sensorimotor transformation, and downstream circuit elements responsible for higher order representations and the delivery of behavior. Zebrafish larvae carrying a mutation in the fmr1 gene have a systematic shift toward sustained premotor activity in this network, and show slower behavioral habituation.

Indexed as

AnimalsAnimals, Genetically ModifiedBrain WavesCalciumFragile X Messenger Ribonucleoprotein 1Habituation, PsychophysiologicLarvaMesencephalonNeuronsReflex, StartleRNA-Binding ProteinsZebrafishZebrafish ProteinsCalciumFmr1 protein, zebrafishFragile X Messenger Ribonucleoprotein 1RNA-Binding ProteinsZebrafish Proteins

Identifiers

PMID35173170
PMCPMC8850451
OpenAlexW4220781431

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.