Evidence map›Paper›PMID 35172475›Full record

ArticleGenomics & informatics2021

Characterization of transcription factor genes related to cold tolerance in Brassica napus.

Mayur Mukut Murlidhar Sharma, Rahul Vasudeo Ramekar, Nam-Il Park, Ik-Young Choi, Seon-Kang Choi, Kyong-Cheul Park

Open access · diamondAbstract read
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Article in Genomics & informatics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Mayur Mukut Murlidhar SharmaDepartment of Agriculture and Life Industries, Kangwon National University, Chuncheon 24341, Korea.
Rahul Vasudeo RamekarDepartment of Agriculture and Life Industries, Kangwon National University, Chuncheon 24341, Korea.
Nam-Il ParkDepartment of Plant Science, Gangneung-Wonju National University, Gangneung 25457, Korea.
Ik-Young ChoiDepartment of Agriculture and Life Industries, Kangwon National University, Chuncheon 24341, Korea.
Seon-Kang ChoiDepartment of Agriculture and Life Industries, Kangwon National University, Chuncheon 24341, Korea.
Kyong-Cheul ParkDepartment of Agriculture and Life Industries, Kangwon National University, Chuncheon 24341, Korea.
Kangwon National University · KRGangneung–Wonju National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Brassica napus is the third most important oilseed crop in the world; however, in Korea, it is greatly affected by cold stress, limiting seed growth and production. Plants have developed specific stress responses that are generally divided into three categories: cold-stress signaling, transcriptional/post-transcriptional regulation, and stress-response mechanisms. Large numbers of functional and regulatory proteins are involved in these processes when triggered by cold stress. Here, our objective was to investigate the different genetic factors involved in the cold-stress responses of B. napus. Consequently, we treated the Korean B. napus cultivar Naehan at the 4-week stage in cold chambers under different conditions, and RNA and cDNA were obtained. An in silico analysis included 80 cold-responsive genes downloaded from the National Center for Biotechnology Information (NCBI) database. Expression levels were assessed by reverse transcription polymerase chain reaction, and 14 cold-triggered genes were identified under cold-stress conditions. The most significant genes encoded zinc-finger proteins (33.7%), followed by MYB transcription factors (7.5%). In the future, we will select genes appropriate for improving the cold tolerance of B. napus.

Indexed as

Brassica napuscold-stresscold-tolerancetanscription factors

Identifiers

PMID35172475
PMCPMC8752983
OpenAlexW4206935468

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.