Evidence map›Paper›PMID 35170357›Full record

ArticleAmerican journal of physiology. Lung cellular and molecular physiology2022

IRE1α drives lung epithelial progenitor dysfunction to establish a niche for pulmonary fibrosis.

Vincent C Auyeung, Michael S Downey, Maike Thamsen, Talia A Wenger, Bradley J Backes, Dean Sheppard, Feroz R Papa

Open access · greenAbstract read
In one paragraph

Article in American journal of physiology. Lung cellular and molecular physiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 35 citations in OpenAlex.

  1. RelA Signaling inInternational journal of molecular sciences · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Evidence that metformin promotes fibrosis resolutionActa pharmaceutica Sinica. B · 2025
    Article
  9. Emerging Concepts in Therapeutic Interventions for Idiopathic Pulmonary Fibrosis.Seminars in respiratory and critical care medicine · 2025
    Review
  10. Article
  11. Review
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Cell-cell interactions and communication dynamics in lung fibrosis.Chinese medical journal pulmonary and critical care medicine · 2024
    Review
  18. BCL-2 Modulates IRE1α Activation to Attenuate Endoplasmic Reticulum Stress and Pulmonary Fibrosis.American journal of respiratory cell and molecular biology · 2024
    Article
  19. Article
  20. Understanding the impact of ER stress on lung physiology.Frontiers in cell and developmental biology · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Vincent C AuyeungDivision of Pulmonary, Critical Care, Allergy, and Sleep Medicine, Department of Medicine, University of California, San Francisco, California.ORCID 0000-0001-6273-1595
Michael S DowneyDivision of Pulmonary, Critical Care, Allergy, and Sleep Medicine, Department of Medicine, University of California, San Francisco, California.ORCID 0000-0001-9818-5274
Maike ThamsenLung Biology Center, University of California, San Francisco, California.
Talia A WengerDivision of Pulmonary, Critical Care, Allergy, and Sleep Medicine, Department of Medicine, University of California, San Francisco, California.
Bradley J BackesLung Biology Center, University of California, San Francisco, California.
Dean SheppardDivision of Pulmonary, Critical Care, Allergy, and Sleep Medicine, Department of Medicine, University of California, San Francisco, California.
Feroz R PapaDepartment of Medicine, University of California, San Francisco, California.ORCID 0000-0002-3684-9108
University of California, San Francisco · US

Funding

MUTIDISCIPLINARY TRAINING PROGRAM IN LUNG DISEASEST32HL007185 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI David J Erle, LAURENCE HUANG · 1985 to 2026
$24.6M
Pharmacological Validation of IRE1 for Diabetes MellitusR01DK100623 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BACKES, BRADLEY J, MALY, DUSTIN J · 2014 to 2022
$4.6M
Interventional Targeting of the IRE1alpha-TGFbeta signaling loop in pulmonary fibrosisR01HL145037 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PAPA, FEROZ R, SHEPPARD, DEAN · 2019 to 2022
$3.0M
IRE1α mediated dysregulation of the pulmonary epithelium in lung fibrosisK08HL157654 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI AUYEUNG, VINCENT CHURK-MAN · 2021 to 2025
$874k
The unfolded protein response and TGF-Beta signaling in pulmonary fibrosisF32HL145990 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI AUYEUNG, VINCENT CHURK-MAN · 2019 to 2020
$137k
NHLBI NIH HHS F32 HL145990NHLBI NIH HHS K08 HL157654NHLBI NIH HHS R01 HL145037NHLBI NIH HHS T32 HL007185NIDDK NIH HHS R01 DK100623
6 · The paper itself

Abstract

After lung injury, damage-associated transient progenitors (DATPs) emerge, representing a transitional state between injured epithelial cells and newly regenerated alveoli. DATPs express profibrotic genes, suggesting that they might promote idiopathic pulmonary fibrosis (IPF). However, the molecular pathways that induce and/or maintain DATPs are incompletely understood. Here we show that the bifunctional kinase/RNase-IRE1α-a central mediator of the unfolded protein response (UPR) to endoplasmic reticulum (ER) stress is a critical promoter of DATP abundance and function. Administration of a nanomolar-potent, monoselective kinase inhibitor of IRE1α (KIRA8)-or conditional epithelial IRE1α gene knockout-both reduce DATP cell number and fibrosis in the bleomycin model, indicating that IRE1α cell-autonomously promotes transition into the DATP state. IRE1α enhances the profibrotic phenotype of DATPs since KIRA8 decreases expression of integrin αvβ6, a key activator of transforming growth factor β (TGF-β) in pulmonary fibrosis, corresponding to decreased TGF-β-induced gene expression in the epithelium and decreased collagen accumulation around DATPs. Furthermore, IRE1α regulates DNA damage response (DDR) signaling, previously shown to promote the DATP phenotype, as IRE1α loss-of-function decreases H2AX phosphorylation,

Indexed as

EndoribonucleasesIdiopathic Pulmonary FibrosisApoptosisEndoplasmic Reticulum StressHumansLungProtein Serine-Threonine KinasesEndoribonucleasesProtein Serine-Threonine KinasesIRE1αkinase inhibitorlung regenerationpulmonary fibrosisunfolded protein response

Identifiers

PMID35170357
PMCPMC8957349
OpenAlexW4220788179

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.