Evidence map›Paper›PMID 35170044›Full record

ArticleThe New phytologist2022

Tomato CRABS CLAW paralogues interact with chromatin remodelling factors to mediate carpel development and floral determinacy.

Laura Castañeda, Estela Giménez, Benito Pineda, Begoña García-Sogo, Ana Ortiz-Atienza, Rosa Micol-Ponce, Trinidad Angosto, Juan Capel, Vicente Moreno, Fernando J Yuste-Lisbona and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The New phytologist, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
7.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 36 citations in OpenAlex.

  1. The Phylogeny of Brassicaceae YABBYs and theInternational journal of molecular sciences · 2026
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  15. Candidate Gene Identification and Transcriptome Analysis of TomatoInternational journal of molecular sciences · 2024
    Article
  16. Insights into the functional role of tomatoHorticulture research · 2024
    Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Laura CastañedaCentro de Investigación en Biotecnología Agroalimentaria (CIAIMBITAL), Universidad de Almería, Almería, 04120, Spain.ORCID 0000-0002-0314-0696
Estela GiménezCentro de Investigación en Biotecnología Agroalimentaria (CIAIMBITAL), Universidad de Almería, Almería, 04120, Spain.ORCID 0000-0002-7403-5279
Benito PinedaInstituto de Biología Molecular y Celular de Plantas (UPV-CSIC), Universidad Politécnica de Valencia, 46022, Valencia, Spain.ORCID 0000-0001-9176-701X
Begoña García-SogoInstituto de Biología Molecular y Celular de Plantas (UPV-CSIC), Universidad Politécnica de Valencia, 46022, Valencia, Spain.
Ana Ortiz-AtienzaCentro de Investigación en Biotecnología Agroalimentaria (CIAIMBITAL), Universidad de Almería, Almería, 04120, Spain.ORCID 0000-0003-1750-4785
Rosa Micol-PonceCentro de Investigación en Biotecnología Agroalimentaria (CIAIMBITAL), Universidad de Almería, Almería, 04120, Spain.ORCID 0000-0001-9389-2906
Trinidad AngostoCentro de Investigación en Biotecnología Agroalimentaria (CIAIMBITAL), Universidad de Almería, Almería, 04120, Spain.ORCID 0000-0003-0294-9255
Juan CapelCentro de Investigación en Biotecnología Agroalimentaria (CIAIMBITAL), Universidad de Almería, Almería, 04120, Spain.ORCID 0000-0002-4327-0604
Vicente MorenoInstituto de Biología Molecular y Celular de Plantas (UPV-CSIC), Universidad Politécnica de Valencia, 46022, Valencia, Spain.ORCID 0000-0002-0345-7300
Fernando J Yuste-LisbonaCentro de Investigación en Biotecnología Agroalimentaria (CIAIMBITAL), Universidad de Almería, Almería, 04120, Spain.ORCID 0000-0001-9222-7293
Rafael LozanoCentro de Investigación en Biotecnología Agroalimentaria (CIAIMBITAL), Universidad de Almería, Almería, 04120, Spain.ORCID 0000-0001-5458-2075
University of Almería · ESInstituto de Biología Molecular y Celular de Plantas · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

CRABS CLAW (CRC) orthologues play a crucial role in floral meristem (FM) determinacy and gynoecium formation across angiosperms, the key developmental processes for ensuring successful plant reproduction and crop production. However, the mechanisms behind CRC mediated FM termination are far from fully understood. Here, we addressed the functional characterization of tomato (Solanum lycopersicum) paralogous CRC genes. Using mapping-by-sequencing, RNA interference and CRISPR/Cas9 techniques, expression analyses, protein-protein interaction assays and Arabidopsis complementation experiments, we examined their potential roles in FM determinacy and carpel formation. We revealed that the incomplete penetrance and variable expressivity of the indeterminate carpel-inside-carpel phenotype observed in fruit iterative growth (fig) mutant plants are due to the lack of function of the S. lycopersicum CRC homologue SlCRCa. Furthermore, a detailed functional analysis of tomato CRC paralogues, SlCRCa and SlCRCb, allowed us to propose that they operate as positive regulators of FM determinacy by acting in a compensatory and partially redundant manner to safeguard the proper formation of flowers and fruits. Our results uncover for the first time the physical interaction of putative CRC orthologues with members of the chromatin remodelling complex that epigenetically represses WUSCHEL expression through histone deacetylation to ensure the proper termination of floral stem cell activity.

Indexed as

Arabidopsis ProteinsSolanum lycopersicumChromatin Assembly and DisassemblyFlowersGene Expression Regulation, PlantMeristemPlant ProteinsArabidopsis ProteinsPlant Proteinscarpel developmentCRABS CLAW (CRC)floral meristem determinacyfruit formationincomplete penetrancetomato (Solanum lycopersicum)variable expressivityWUSCHEL (WUS)

Identifiers

PMID35170044
PMCPMC9314824
OpenAlexW4220880177

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.