Evidence map›Paper›PMID 35169685›Full record

ArticleiScience2022

Development of human alveolar epithelial cell models to study distal lung biology and disease.

Evelyn Tran, Tuo Shi, Xiuwen Li, Adnan Y Chowdhury, Du Jiang, Yixin Liu, Hongjun Wang, Chunli Yan, William D Wallace, Rong Lu and 5 more

Open access · goldAbstract read
In one paragraph

Article in iScience, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 32 citations in OpenAlex.

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  20. Metabolomics of VToxicology and applied pharmacology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 1 country.

Evelyn TranDepartment of Surgery, Keck School of Medicine, University of Southern California (USC), Los Angeles, CA 90033, USA.
Tuo ShiDepartment of Surgery, Keck School of Medicine, University of Southern California (USC), Los Angeles, CA 90033, USA.
Xiuwen LiUSC Norris Comprehensive Cancer Center, Keck School of Medicine, USC, Los Angeles, CA 90033, USA.
Adnan Y ChowdhuryDepartment of Stem Cell Biology and Regenerative Medicine, Eli and Edythe Broad CIRM Center for Regenerative Medicine and Stem Cell Research, Keck School of Medicine, USC, Los Angeles, CA 90033, USA.
Du JiangDepartment of Stem Cell Biology and Regenerative Medicine, Eli and Edythe Broad CIRM Center for Regenerative Medicine and Stem Cell Research, Keck School of Medicine, USC, Los Angeles, CA 90033, USA.
Yixin LiuHastings Center for Pulmonary Research and Division of Pulmonary, Critical Care and Sleep Medicine, Department of Medicine, Keck School of Medicine, USC, Los Angeles, CA 90033, USA.
Hongjun WangHastings Center for Pulmonary Research and Division of Pulmonary, Critical Care and Sleep Medicine, Department of Medicine, Keck School of Medicine, USC, Los Angeles, CA 90033, USA.
Chunli YanDepartment of Surgery, Keck School of Medicine, University of Southern California (USC), Los Angeles, CA 90033, USA.
William D WallaceDepartment of Pathology, Keck School of Medicine, USC, Los Angeles, CA 90033, USA.
Rong LuDepartment of Stem Cell Biology and Regenerative Medicine, Eli and Edythe Broad CIRM Center for Regenerative Medicine and Stem Cell Research, Keck School of Medicine, USC, Los Angeles, CA 90033, USA.
Amy L RyanDepartment of Stem Cell Biology and Regenerative Medicine, Eli and Edythe Broad CIRM Center for Regenerative Medicine and Stem Cell Research, Keck School of Medicine, USC, Los Angeles, CA 90033, USA.
Crystal N MarconettDepartment of Surgery, Keck School of Medicine, University of Southern California (USC), Los Angeles, CA 90033, USA.
Beiyun ZhouUSC Norris Comprehensive Cancer Center, Keck School of Medicine, USC, Los Angeles, CA 90033, USA.
Zea BorokUSC Norris Comprehensive Cancer Center, Keck School of Medicine, USC, Los Angeles, CA 90033, USA.
Ite A OffringaDepartment of Surgery, Keck School of Medicine, University of Southern California (USC), Los Angeles, CA 90033, USA.
Hastings Center · USUniversity of Southern California · USBroad Center · USKeck Hospital of USC · USUSC Norris Comprehensive Cancer Center · US

Funding

USC/NORRIS COMPREHENSIVE CANCER CENTER (CORE) SUPPORTP30CA014089 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MYLES G COCKBURN · 1985 to 2026
$181.4M
Vector Core-Core 2P30DK054759 · NIDDK · UNIVERSITY OF IOWA · PI Amy Leanne Ryan · 1998 to 2026
$30.5M
Tissue Modeling CoreU54CA233465 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ITE A OFFRINGA · 2018 to 2026
$11.9M
Investigating the heterogeneity and coordination of hematopoietic stem cells (Diversity Supplement)R35HL150826 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Rong Lu · 2020 to 2026
$6.8M
Beyond the Barrier: Alveolar Epithelial Cell Biology in Health and DiseaseR35HL135747 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI BOROK, ZEA · 2017 to 2023
$6.8M
Role of Chaperone GRP78 and Mitochondrial Dysfunction in ER Stress-Mediated Pulmonary FibrosisR01HL114959 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ANN, DAVID K., ZHOU, BEIYUN · 2013 to 2025
$4.2M
Epigenetic profiling of human alveolar epithelial cells in health and diseaseR01HL114094 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI BOROK, ZEA, OFFRINGA, ITE A · 2011 to 2015
$3.3M
Characterization of mechanisms regulating multiciliated cell specification using patient-specific induced pluripotent stem cells.R01HL139828 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI RYAN, AMY LEANNE · 2018 to 2022
$2.5M
Tracing the developmental origin of hematopoietic stem cell heterogeneityR01HL138225 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI LU, RONG · 2017 to 2019
$1.6M
Investigating the heterogeneous aging of individual hematopoietic stem cell clonesR01HL135292 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI LU, RONG · 2017 to 2019
$1.5M
Lineage bias and clonal expansion of hematopoietic stem cell differentiationR00HL113104 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI LU, RONG · 2014 to 2016
$747k
NCI NIH HHS P30 CA014089NCI NIH HHS U54 CA233465NHLBI NIH HHS R00 HL113104NHLBI NIH HHS R01 HL114094NHLBI NIH HHS R01 HL114959NHLBI NIH HHS R01 HL135292NHLBI NIH HHS R01 HL138225NHLBI NIH HHS R01 HL139828NHLBI NIH HHS R35 HL135747NHLBI NIH HHS R35 HL150826NIDDK NIH HHS P30 DK054759
6 · The paper itself

Abstract

Many acute and chronic diseases affect the distal lung alveoli. Alveolar epithelial cell (AEC) lines are needed to better model these diseases. We used de-identified human remnant transplant lungs to develop a method to establish AEC lines. The lines grow well in 2-dimensional (2D) culture as epithelial monolayers expressing lung progenitor markers. In 3-dimensional (3D) culture with fibroblasts, Matrigel, and specific media conditions, the cells form alveolar-like organoids expressing mature AEC markers including aquaporin 5 (AQP5), G-protein-coupled receptor class C group 5 member A (GPRC5A), and surface marker HTII280. Single-cell RNA sequencing of an AEC line in 2D versus 3D culture revealed increased cellular heterogeneity and induction of cytokine and lipoprotein signaling in 3D organoids. Our approach yields lung progenitor lines that retain the ability to differentiate along the alveolar cell lineage despite long-term expansion and provides a valuable system to model and study the distal lung

Indexed as

Cell biologyDevelopmental biologyStem cells researchTranscriptomics

Identifiers

PMID35169685
PMCPMC8829779
OpenAlexW4206719917

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.