Evidence map›Paper›PMID 35167162›Full record

ArticleMolecular ecology2022

Local adaptation and spatiotemporal patterns of genetic diversity revealed by repeated sampling of Caenorhabditis elegans across the Hawaiian Islands.

Timothy A Crombie, Paul Battlay, Robyn E Tanny, Kathryn S Evans, Claire M Buchanan, Daniel E Cook, Clayton M Dilks, Loraina A Stinson, Stefan Zdraljevic, Gaotian Zhang and 5 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular ecology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Global genomic diversity of the selfing nematodebioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. bioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. Fecundities of HawaiianmicroPublication biology · 2025
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Genetic variation in parasite avoidance, yet no evidence for constitutive fitness costs.Evolution; international journal of organic evolution · 2024
    Article
  16. Article
  17. Article
  18. Genetic architecture of the response ofFrontiers in plant science · 2023
    Article
  19. Natural variation inGenome research · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 2 countries.

Timothy A CrombieDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, USA.ORCID 0000-0002-5645-4154
Paul BattlaySchool of Biological Sciences, Monash University, Melbourne, Victoria, Australia.ORCID 0000-0001-6050-1868
Robyn E TannyDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, USA.ORCID 0000-0002-0611-3909
Kathryn S EvansDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, USA.ORCID 0000-0002-1388-8155
Claire M BuchananDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, USA.ORCID 0000-0003-3725-3469
Daniel E CookDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, USA.ORCID 0000-0003-3347-562X
Clayton M DilksDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, USA.ORCID 0000-0002-4622-8460
Loraina A StinsonDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, USA.ORCID 0000-0002-9664-7030
Stefan ZdraljevicDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, USA.ORCID 0000-0003-2883-4616
Gaotian ZhangDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, USA.ORCID 0000-0001-6468-1341
Nicole M RobertoDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, USA.ORCID 0000-0002-8339-0627
Daehan LeeDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, USA.ORCID 0000-0002-0546-8484
Michael AilionDepartment of Biochemistry, University of Washington, Seattle, Washington, USA.ORCID 0000-0002-8070-1362
Kathryn A HodginsSchool of Biological Sciences, Monash University, Melbourne, Victoria, Australia.ORCID 0000-0003-2795-5213
Erik C AndersenDepartment of Molecular Biosciences, Northwestern University, Evanston, Illinois, USA.ORCID 0000-0003-0229-9651
Northwestern University · USMonash University · AUUniversity of Washington · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The nematode Caenorhabditis elegans is among the most widely studied organisms, but relatively little is known about its natural ecology. Genetic diversity is low across much of the globe but high in the Hawaiian Islands and across the Pacific Rim. To characterize the niche and genetic diversity of C. elegans on the Hawaiian Islands and to explore how genetic diversity might be influenced by local adaptation, we repeatedly sampled nematodes over a three-year period, measured various environmental parameters at each sampling site, and whole-genome sequenced the C. elegans isolates that we identified. We found that the typical Hawaiian C. elegans niche comprises moderately moist native forests at high elevations (500-1,500 m) where ambient air temperatures are cool (15-20°C). Compared to other Caenorhabditis species found on the Hawaiian Islands (e.g., Caenorhabditis briggsae and Caenorhabditis tropicalis), we found that C. elegans were enriched in native habitats. We measured levels of genetic diversity and differentiation among Hawaiian C. elegans and found evidence of seven genetically distinct groups distributed across the islands. Then, we scanned these genomes for signatures of local adaptation and identified 18 distinct regions that overlap with hyper-divergent regions, which may be maintained by balancing selection and are enriched for genes related to environmental sensing, xenobiotic detoxification, and pathogen resistance. These results provide strong evidence of local adaptation among Hawaiian C. elegans and contribute to our understanding of the forces that shape genetic diversity on the most remote volcanic archipelago in the world.

Indexed as

CaenorhabditisCaenorhabditis elegansAnimalsGenetic VariationHawaiiIslandsCaenorhabditisCaenorhabditis elegansgenetic diversitylocal adaptationniche

Identifiers

PMID35167162
PMCPMC9306471
OpenAlexW4226154920

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.