Evidence map›Paper›PMID 35166928›Full record

ArticleArchives of microbiology2022

Characterization and genomic analysis of a Demerecviridae phage SP76 with lytic multiple-serotypes of Salmonella.

Hui Wang, Yun Shen, Pei Li, Yuyi Xiao, Yanxiu Li, Xiapei Hu, Zhuohao Wang, Zile Cheng, Zitong Wang, Qingxin Liu and 6 more

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. The potential of using bacteriophages targetingFrontiers in microbiology · 2025
    Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 3 countries.

Hui Wang *College of Veterinary Medicine, Nanjing Agricultural University, Nanjing, 210095, China.
Yun Shen *Jiangsu Provincial Center for Disease Control and Prevention, Nanjing, 210009, China.
Pei LiCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, 210095, China.
Yuyi XiaoCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, 210095, China.
Yanxiu LiCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, 210095, China.
Xiapei HuCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, 210095, China.
Zhuohao WangCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, 210095, China.
Zile ChengCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, 210095, China.
Zitong WangCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, 210095, China.
Qingxin LiuCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, 210095, China.
Si QinJiangsu Provincial Center for Disease Control and Prevention, Nanjing, 210009, China.
Xiang HuoJiangsu Provincial Center for Disease Control and Prevention, Nanjing, 210009, China.
Kai MaJiangsu Provincial Center for Disease Control and Prevention, Nanjing, 210009, China.
Wei ZhangCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, 210095, China. vszw@njau.edu.cn.ORCID http://orcid.org/0000-0002-3575-6225
Haiyan ZhangDepartment of Biology Engineering, Wuhu Institute of Technology, Wuhu, 241003, China. zhysky_0000@163.com.
Liqun WangCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, 210095, China. 65453588@qq.com.
Nanjing Agricultural University · CNJiangsu Provincial Center for Disease Control and Prevention · CNWuhu Institute of Technology · CN

Funding

Innovative Research Group Project of the National Natural Science Foundation of China U1803109Jiangsu Provincial Key Research and Development Program BE2019304National key research and development program of China 2018YFC1602500University-level science and technology team of Wuhu institute of technology wzykjtd202002
6 · The paper itself

Abstract

With the increase in antimicrobial resistance of Salmonella, phages have been paid more attention to as an alternative to antibiotics. In this study, a phage designated as SP76 was isolated from sewage. It can lyse several serotypes of Salmonella, including S. typhimurium (21/33), S. enteritidis (7/7), S. dublin (4/4), S. pullorum (2/2) and S. choleraesuis (1/2). SP76 showed a latent time of about 10 min, and maintained good lytic activity at a pH range of 3-10 and temperatures between 4 and 37 °C. Moreover, its optimal multiplicity of infection (MOI) was 0.0001. Based on the results of genomic sequence and analysis, SP76 was found to have a genome of 111,639 bp that encoded 166 predicted ORFs and belong to the Demerecviridae family, order Caudovirales. No virulence or lysogen formation gene clusters were identified in the SP76 genome. A pan-genome analysis based on 100 phages within the subfamily Markadamsvirinae indicated that SP76 had 23 core genes and 1199 accessory genes. We grouped the subfamily Markadamsvirinae and found that the main difference was in group III. In vitro bacteriostasis, experiments showed that the phage SP76 reduced planktonic bacteria by 1.52 log10 CFU/mL, and biofilms (24 h old) by 0.372 log10 CFU/mL, respectively. Thus, we isolated a safe and efficient phage that might be a good antibacterial agent.

Indexed as

BacteriophagesGenome, ViralGenomicsSalmonella enteritidisSerogroupBacteriostasis in vitroBiological characterizationGenome sequencingPan-genomic analysisPhage

Identifiers

PMID35166928
OpenAlexW4212983728

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.