Evidence map›Paper›PMID 35166840›Full record

ArticlePlant physiology2022

Early seed development requires the A-type ATP-binding cassette protein ABCA10.

Seungjun Shin, Chayanee Chairattanawat, Yasuyo Yamaoka, Qianying Yang, Youngsook Lee, Jae-Ung Hwang

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Genome-Wide Identification and Analysis of theInternational journal of molecular sciences · 2023
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Seungjun ShinDepartment of Life Sciences, Pohang University of Science and Technology, Pohang 37673, Republic of Korea.ORCID 0000-0002-4379-191X
Chayanee ChairattanawatDepartment of Life Sciences, Pohang University of Science and Technology, Pohang 37673, Republic of Korea.ORCID 0000-0002-3587-7027
Yasuyo YamaokaDivision of Biotechnology, The Catholic University of Korea, Bucheon 14662, Republic of Korea.ORCID 0000-0002-0708-8872
Qianying YangDepartment of Life Sciences, Pohang University of Science and Technology, Pohang 37673, Republic of Korea.ORCID 0000-0003-1628-571X
Youngsook LeeDepartment of Life Sciences, Pohang University of Science and Technology, Pohang 37673, Republic of Korea.ORCID 0000-0002-5808-9613
Jae-Ung HwangDepartment of Integrative Biosciences and Biotechnology, Pohang University of Science and Technology, Pohang 37673, Republic of Korea.ORCID 0000-0001-9751-0522
Pohang University of Science and Technology · KRCatholic University of Korea · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A-type ATP-binding cassette (ABCA) proteins transport lipids and lipid-based molecules in humans, and their malfunction is associated with various inherited diseases. Although plant genomes encode many ABCA transporters, their molecular and physiological functions remain largely unknown. Seeds are rapidly developing organs that rely on the biosynthesis and transport of large quantities of lipids to generate new membranes and storage lipids. In this study, we characterized the Arabidopsis (Arabidopsis thaliana) ABCA10 transporter, which is selectively expressed in female gametophytes and early developing seeds. By 3 d after flowering (DAF), seeds from the abca10 loss-of-function mutant exhibited a smaller chalazal endosperm than those of the wild-type. By 4 DAF, their endosperm nuclei occupied a smaller area than those of the wild-type. The endosperm nuclei of the mutants also failed to distribute evenly inside the seed coat and stayed aggregated instead, possibly due to inadequate expansion of abca10 endosperm. This endosperm defect might have retarded abca10 embryo development. At 7 DAF, a substantial portion of abca10 embryos remained at the globular or earlier developmental stages, whereas wild-type embryos were at the torpedo or later stages. ABCA10 is likely involved in lipid metabolism, as ABCA10 overexpression induced the overaccumulation of triacylglycerol but did not change the carbohydrate or protein contents in seeds. In agreement, ABCA10 localized to the endoplasmic reticulum (ER), the major site of lipid biosynthesis. Our results reveal that ABCA10 plays an essential role in early seed development, possibly by transporting substrates for lipid metabolism to the ER.

Indexed as

ArabidopsisArabidopsis ProteinsAdenosine TriphosphateEndospermGene Expression Regulation, PlantHumansLipidsSeedsAdenosine TriphosphateArabidopsis ProteinsLipids

Identifiers

PMID35166840
PMCPMC9070825
OpenAlexW4211180638

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.