Evidence map›Paper›PMID 35163767›Full record

ArticleInternational journal of molecular sciences2022

Identification of a Negative Regulator for Salt Tolerance at Seedling Stage via a Genome-Wide Association Study of Thai Rice Populations.

Thammaporn Kojonna, Thiti Suttiyut, Nopphakhun Khunpolwattana, Monnat Pongpanich, Duangjai Suriya-Arunroj, Luca Comai, Teerapong Buaboocha, Supachitra Chadchawan

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

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  7. International journal of molecular sciences · 2023
    Article
  8. Molecular Research in Rice.International journal of molecular sciences · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Thammaporn KojonnaBiotechnology Program, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand.
Thiti SuttiyutCenter of Excellence in Environment and Plant Physiology (CEEPP), Department of Botany, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand.ORCID 0000-0003-0643-9244
Nopphakhun KhunpolwattanaCenter of Excellence in Environment and Plant Physiology (CEEPP), Department of Botany, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand.
Monnat PongpanichDepartment of Mathematics and Computer Science, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand.
Duangjai Suriya-ArunrojRice Department, Ministry of Agriculture and Cooperatives, Bangkok 10900, Thailand.
Luca ComaiDepartment of Plant Biology and Genome Center, University of California Davis, Davis, CA 95616, USA.
Teerapong BuaboochaOmics Sciences and Bioinformatics Center, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand.
Supachitra ChadchawanCenter of Excellence in Environment and Plant Physiology (CEEPP), Department of Botany, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand.
Chulalongkorn University · THMinistry of Agriculture and Cooperatives · THUniversity of California, Davis · US

Funding

Agricultural Research Development Agency 2556NRCT51954
6 · The paper itself

Abstract

Salt stress is a major limiting factor in crop production and yield in many regions of the world. The objective of this study was to identify the genes responsible for salt tolerance in Thai rice populations. We performed a genome-wide association study with growth traits, relative water content, and cell membrane stability at the seedling stage, and predicted 25 putative genes. Eleven of them were located within previously reported salt-tolerant QTLs (ST-QTLs).

Indexed as

Quantitative Trait LociSalt ToleranceChromosome MappingGene Expression Regulation, PlantGenome-Wide Association StudyMutationOryzaPhenotypePhotosynthesisPlant ProteinsPolymorphism, Single NucleotideSeedlingsPlant Proteinsgenome-wide association study (GWAS)OsCRNricesalt responseseedling stage

Identifiers

PMID35163767
PMCPMC8836775
OpenAlexW4210749146

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.