Evidence map›Paper›PMID 35163455›Full record

ArticleInternational journal of molecular sciences2022

A Transcriptome Analysis of mRNAs and Long Non-Coding RNAs in Patients with Parkinson's Disease.

Michele Salemi, Giuseppe Lanza, Maria Paola Mogavero, Filomena I I Cosentino, Eugenia Borgione, Roberta Iorio, Giovanna Maria Ventola, Giovanna Marchese, Maria Grazia Salluzzo, Maria Ravo and 1 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 28 citations in OpenAlex.

  1. Pooled it
  2. Taurochenodeoxycholic acid alleviates MPPIBRO neuroscience reports · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. The Y831C Mutation of theBiomedicines · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Michele SalemiOasi Research Institute-IRCCS, 94018 Troina, Italy.
Giuseppe LanzaOasi Research Institute-IRCCS, 94018 Troina, Italy.ORCID 0000-0002-5659-662X
Maria Paola MogaveroIstituti Clinici Scientifici Maugeri, IRCCS, 27100 Pavia, Italy.ORCID 0000-0001-6662-2281
Filomena I I CosentinoOasi Research Institute-IRCCS, 94018 Troina, Italy.
Eugenia BorgioneOasi Research Institute-IRCCS, 94018 Troina, Italy.ORCID 0000-0001-5458-7415
Roberta IorioGenomix4Life Srl, 84081 Baronissi, Italy.
Giovanna Maria VentolaGenomix4Life Srl, 84081 Baronissi, Italy.
Giovanna MarcheseGenomix4Life Srl, 84081 Baronissi, Italy.
Maria Grazia SalluzzoOasi Research Institute-IRCCS, 94018 Troina, Italy.
Maria RavoGenomix4Life Srl, 84081 Baronissi, Italy.ORCID 0000-0003-1003-2922
Raffaele FerriOasi Research Institute-IRCCS, 94018 Troina, Italy.ORCID 0000-0001-6937-3065
Oasi Maria SS · ITCenter for Genomic Science · ITIstituti Clinici Scientifici Maugeri · ITUniversity of Catania · IT

Funding

Italian Ministry of Health RC-2764019.
6 · The paper itself

Abstract

Parkinson's disease (PD) is the second most common neurodegenerative disorder. The number of cases of PD is expected to double by 2030, representing a heavy burden on the healthcare system. Clinical symptoms include the progressive loss of dopaminergic neurons in the substantia nigra of the midbrain, which leads to striatal dopamine deficiency and, subsequently, causes motor dysfunction. Certainly, the study of the transcriptome of the various RNAs plays a crucial role in the study of this neurodegenerative disease. In fact, the aim of this study was to evaluate the transcriptome in a cohort of subjects with PD compared with a control cohort. In particular we focused on mRNAs and long non-coding RNAs (lncRNA), using the Illumina NextSeq 550 DX System. Differential expression analysis revealed 716 transcripts with padj ≤ 0.05; among these, 630 were mRNA (coding protein), lncRNA, and MT_tRNA. Ingenuity pathway analysis (IPA, Qiagen) was used to perform the functional and pathway analysis. The highest statistically significant pathways were: IL-15 signaling, B cell receptor signaling, systemic lupus erythematosus in B cell signaling pathway, communication between innate and adaptive immune cells, and melatonin degradation II. Our findings further reinforce the important roles of mitochondria and lncRNA in PD and, in parallel, further support the concept of inverse comorbidity between PD and some cancers.

Indexed as

Gene Regulatory NetworksAgedAged, 80 and overCase-Control StudiesFemaleGene Expression ProfilingHigh-Throughput Nucleotide SequencingHumansMaleMiddle AgedParkinson DiseaseRNA, Long NoncodingSequence Analysis, RNARNA, Long Noncodinginverse comorbiditylong non-coding RNAsmRNAsParkinson’s diseaseRNA sequencingtranscriptome analysis

Identifiers

PMID35163455
PMCPMC8836138
OpenAlexW4210644469

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.