Evidence map›Paper›PMID 35151975›Full record

ArticleJournal of magnetic resonance (San Diego, Calif. : 1997)2022

Stability of the nitroxide biradical AMUPol in intact and lysed mammalian cells.

Rupam Ghosh, Rania Dumarieh, Yiling Xiao, Kendra K Frederick

Open access · hybridAbstract read
In one paragraph

Article in Journal of magnetic resonance (San Diego, Calif. : 1997), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Spatially resolved DNP-assisted NMR illuminates the conformational ensemble of α-synuclein in intact viable cells.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Stability of the polarization agent AsymPolPOK in intact and lysed mammalian cells.Journal of magnetic resonance (San Diego, Calif. : 1997) · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Rupam GhoshDepartment of Biophysics, UT Southwestern Medical Center, Dallas, 75390-8816, United States.
Rania DumariehDepartment of Biophysics, UT Southwestern Medical Center, Dallas, 75390-8816, United States.
Yiling XiaoDepartment of Biophysics, UT Southwestern Medical Center, Dallas, 75390-8816, United States.
Kendra K FrederickDepartment of Biophysics, UT Southwestern Medical Center, Dallas, 75390-8816, United States; Center for Neurodegenerative and Alzheimer's Disease, UT Southwestern Medical Center, Dallas 75390, United States. Electronic address: kendra.frederick@utsouthwestern.edu.
Southwestern Medical Center · USThe University of Texas Southwestern Medical Center · US

Funding

High sensitivity NMR for structure determination of neurodegenerative disease associated protein aggregates in native contextsDP2NS111236 · NINDS · UT SOUTHWESTERN MEDICAL CENTER · PI FREDERICK, KENDRA KING · 2018 to 2018
$2.4M
NINDS NIH HHS DP2 NS111236
6 · The paper itself

Abstract

Dynamic Nuclear Polarization (DNP) enhanced solid state NMR increases experimental sensitivity, potentially enabling detection of biomolecules at their physiological concentrations. The sensitivity of DNP experiments is due to the transfer of polarization from electron spins of free radicals to the nuclear spins of interest. Here, we investigate the reduction of AMUPol in both lysed and intact HEK293 cells. We find that nitroxide radicals are reduced with first order reduction kinetics by cell lysates at a rate of ∼ 12% of the added nitroxide radical concentration per hour. We also found that electroporation delivered a consistent amount of AMUPol to intact cells and that nitroxide radicals are reduced just slightly more rapidly (∼15% per hour) by intact cells than by cell lysates. The two nitroxide radicals of AMUPol are reduced independently and this leads to considerable accumulation of the DNP-silent monoradical form of AMUPol, particularly in preparations of intact cells where nearly half of the AMUPol is already reduced to the DNP silent monoradical form at the earliest experimental time points. This confirms that the loss of the DNP-active biradical form of AMUPol is faster than the nitroxide reduction rate. Finally, we investigate the effect of adding N-ethyl maleimide, a well-known inhibitor of thiol (-SH) group-based reduction of nitroxide biradicals in cells, on AMUPol reduction, cellular viability, and DNP performance. Although pre-treatment of cells with NEM effectively inhibited the reduction of AMUPol, exposure to NEM compromised cellular viability and, surprisingly, did not improve DNP performance. Collectively, these results indicate that, currently, the most effective strategy to obtain high DNP enhancements for DNP-assisted in-cell NMR is to minimize room temperature contact times with cellular constituents and suggest that the development of bio-resistant polarization agents for DNP could considerably increase the sensitivity of DNP-assisted in-cell NMR experiments.

Indexed as

Nitrogen OxidesFree RadicalsHEK293 CellsHumansMagnetic Resonance SpectroscopyFree RadicalsNitrogen OxidesnitroxylAMUPolDNP NMRIn-cell EPRIn-cell NMRPolarizing agent

Identifiers

PMID35151975
PMCPMC8961433
OpenAlexW4210330826

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.