Evidence map›Paper›PMID 35150073›Full record

ArticleTransboundary and emerging diseases2022

Genotyping of foot-and-mouth disease viruses collected in Sudan between 2009 and 2018.

Yazeed A Raouf, Jemma Wadsworth, Abdelghani Bin-Tarif, Ashley R Gray, Mohammed Habiela, Ameera A Almutalb, Hanan Yousif, Maysa Ragab, Wefag Alfouz, Nussiba H Ahmed and 8 more

Open access · hybridAbstract read
In one paragraph

Article in Transboundary and emerging diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 3 institutions in 5 countries.

Yazeed A RaoufFoot-and-Mouth-Disease Department, Central Veterinary Research Laboratory (CVRL), Soba, Al Amarat, Khartoum, Sudan.
Jemma WadsworthFAO World Reference Laboratory for FMD (WRLFMD), The Pirbright Institute, Woking, Surrey, UK.
Abdelghani Bin-TarifFAO World Reference Laboratory for FMD (WRLFMD), The Pirbright Institute, Woking, Surrey, UK.
Ashley R GrayFAO World Reference Laboratory for FMD (WRLFMD), The Pirbright Institute, Woking, Surrey, UK.
Mohammed HabielaFoot-and-Mouth-Disease Department, Central Veterinary Research Laboratory (CVRL), Soba, Al Amarat, Khartoum, Sudan.
Ameera A AlmutalbFoot-and-Mouth-Disease Department, Central Veterinary Research Laboratory (CVRL), Soba, Al Amarat, Khartoum, Sudan.
Hanan YousifFoot-and-Mouth-Disease Department, Central Veterinary Research Laboratory (CVRL), Soba, Al Amarat, Khartoum, Sudan.
Maysa RagabFoot-and-Mouth-Disease Department, Central Veterinary Research Laboratory (CVRL), Soba, Al Amarat, Khartoum, Sudan.
Wefag AlfouzFoot-and-Mouth-Disease Department, Central Veterinary Research Laboratory (CVRL), Soba, Al Amarat, Khartoum, Sudan.
Nussiba H AhmedFoot-and-Mouth-Disease Department, Central Veterinary Research Laboratory (CVRL), Soba, Al Amarat, Khartoum, Sudan.
Inas IbrahimFoot-and-Mouth-Disease Department, Central Veterinary Research Laboratory (CVRL), Soba, Al Amarat, Khartoum, Sudan.
Ahmed M HassanFoot-and-Mouth-Disease Department, Central Veterinary Research Laboratory (CVRL), Soba, Al Amarat, Khartoum, Sudan.
Markos TibboFood and Agriculture Organization of the United Nations (FAO), Subregional Office for the Gulf Cooperation Council States and Yemen, Abu Dhabi, United Arab Emirates.
Ahmad M AlmajaliFood and Agriculture Organization of the United Nations (FAO), Subregional Office for the Gulf Cooperation Council States and Yemen, Abu Dhabi, United Arab Emirates.
Cornelis van MaanenThe European Commission for the Control of Foot-and-Mouth Disease (EuFMD), Food and Agriculture Organization of the United Nations (FAO), Rome, Italy.
Nicholas A LyonsFAO World Reference Laboratory for FMD (WRLFMD), The Pirbright Institute, Woking, Surrey, UK.
Donald P KingFAO World Reference Laboratory for FMD (WRLFMD), The Pirbright Institute, Woking, Surrey, UK.
Nick J KnowlesFAO World Reference Laboratory for FMD (WRLFMD), The Pirbright Institute, Woking, Surrey, UK.ORCID https://orcid.org/0000-0002-6696-1344
Central Veterinary Research Laboratory · AEThe Pirbright Institute · GBFood and Agriculture Organization of the United Nations · IT

Funding

Biotechnology and Biological Sciences Research Council BBS/E/I/00007036Biotechnology and Biological Sciences Research Council of the United Kingdom BBS/E/I/00007035Biotechnology and Biological Sciences Research Council of the United Kingdom BBS/E/I/00007036Department for Environment, Food and Rural Affairs (Defra), UK SE2944FAO Technical Corporation Programme TCP/SUD/3401
6 · The paper itself

Abstract

Foot-and-mouth disease (FMD) is widely distributed in Sudan where outbreaks occur on an annual basis especially during the winter months (December-February). This study aimed to increase our understanding of the epidemiological patterns of FMD in Sudan and connections to neighbouring countries by characterizing the genetic sequences of FMD viruses (FMDV) collected from samples collected in 10 Sudanese states over a 10-year period (between 2009 and 2018). FMDV was detected in 91 of the 265 samples using an antigen-detection ELISA. Three serotypes were detected: O (46.2%), A (34.0%), and SAT 2 (19.8%). Fifty-two of these samples were submitted for sequence analyses, generating sequences that were characterized as belonging to O/EA-3 (n = 17), A/AFRICA/G-IV (n = 23) and SAT 2/VII/Alx-12 (n = 12) viral lineages. Phylogenetic analyses provided evidence that FMDV lineages were maintained within Sudan, and also highlighted epidemiological connections to FMD outbreaks reported in neighbouring countries in East and North Africa (such as Ethiopia and Egypt). This study motivates continued FMD surveillance in Sudan to monitor the circulating viral lineages and broader initiatives to improve our understanding of the epidemiological risks in the region.

Indexed as

Cattle DiseasesFoot-and-Mouth DiseaseFoot-and-Mouth Disease VirusAnimalsCattleDisease OutbreaksGenotypePhylogenySerogroupSudanAphthovirusepidemiologyfoot-and-mouth diseasenucleotide sequenceSudan

Identifiers

PMID35150073
PMCPMC9790298
OpenAlexW4210987391

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.