Evidence map›Paper›PMID 35149686›Full record

ArticleNature communications2022

Single-cell RNA sequencing reveals time- and sex-specific responses of mouse spinal cord microglia to peripheral nerve injury and links ApoE to chronic pain.

Shannon Tansley, Sonali Uttam, Alba Ureña Guzmán, Moein Yaqubi, Alain Pacis, Marc Parisien, Haley Deamond, Calvin Wong, Oded Rabau, Nicole Brown and 13 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 106 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
106citing papers in PubMed, 2 pooled it
13.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

106 citing papers in PubMed, 2 syntheses or guidelines pooled it, 161 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Glial cells in neuropathic pain.Physiological reviews · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Alzheimer's Disease Risk Factor APOE4 Exerts Dimorphic Effects on Female Bone.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. Article

46 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 6 institutions in 2 countries.

Shannon Tansley *Department of Anesthesia and Faculty of Dental Medicine and Oral Health Sciences, McGill University, Montréal, QC, Canada.
Sonali Uttam *Department of Anesthesia and Faculty of Dental Medicine and Oral Health Sciences, McGill University, Montréal, QC, Canada.
Alba Ureña Guzmán *Department of Anesthesia and Faculty of Dental Medicine and Oral Health Sciences, McGill University, Montréal, QC, Canada.ORCID http://orcid.org/0000-0003-3942-9608
Moein YaqubiNeuroimmunology Unit, Montreal Neurological Institute, McGill University, Québec, Canada.ORCID http://orcid.org/0000-0001-7299-5930
Alain PacisCanadian Centre for Computational Genomics, McGill Genome Centre, Montréal, QC, Canada.
Marc ParisienDepartment of Anesthesia and Faculty of Dental Medicine and Oral Health Sciences, McGill University, Montréal, QC, Canada.ORCID http://orcid.org/0000-0003-2924-5960
Haley DeamondDepartment of Pharmacology and Therapeutics, McGill University, Montreal, Canada.ORCID http://orcid.org/0000-0002-2900-246X
Calvin WongDepartment of Anesthesia and Faculty of Dental Medicine and Oral Health Sciences, McGill University, Montréal, QC, Canada.ORCID http://orcid.org/0000-0001-7728-3035
Oded RabauMcGill Scoliosis and Spine Group, Department of Surgery, McGill University, Montreal, QC, Canada.
Nicole BrownDepartment of Anesthesia and Faculty of Dental Medicine and Oral Health Sciences, McGill University, Montréal, QC, Canada.
Lisbet HaglundThe Orthopaedic Research Laboratory, Department of Surgery, McGill University, Montreal, Canada.ORCID http://orcid.org/0000-0002-1288-2149
Jean OuelletMcGill Scoliosis and Spine Group, Department of Surgery, McGill University, Montreal, QC, Canada.
Carlo SantaguidaDepartment of Neurology & Neurosurgery, Montreal Neurological Institute, McGill University, Montreal, Canada.
Alfredo Ribeiro-da-SilvaAlan Edwards Centre for Research on Pain, McGill University, Montréal, QC, Canada.ORCID http://orcid.org/0000-0002-4125-0255
Soroush TahmasebiDepartment of Pharmacology and Regenerative Medicine, University of Illinois at Chicago, Chicago, IL, 60612, USA.
Masha Prager-KhoutorskyDepartment of Physiology, McGill University, Montreal, QC, Canada.ORCID http://orcid.org/0000-0001-5388-4602
Jiannis RagoussisDepartment of Human Genetics and Department of Bioengineering, McGill University, Montreal, QC, Canada.ORCID http://orcid.org/0000-0002-8515-0934
Ji ZhangAlan Edwards Centre for Research on Pain, McGill University, Montréal, QC, Canada.
Michael W SalterNeurosciences & Mental Health Program, Hospital for Sick Children, Department of Physiology, Faculty of Medicine, University of Toronto, Toronto, ON, Canada.ORCID http://orcid.org/0000-0001-6897-6585
Luda DiatchenkoDepartment of Anesthesia and Faculty of Dental Medicine and Oral Health Sciences, McGill University, Montréal, QC, Canada.ORCID http://orcid.org/0000-0002-1350-6727
Luke M HealyNeuroimmunology Unit, Montreal Neurological Institute, McGill University, Québec, Canada. luke.healy@mcgill.ca.
Jeffrey S MogilDepartment of Anesthesia and Faculty of Dental Medicine and Oral Health Sciences, McGill University, Montréal, QC, Canada. jeffrey.mogil@mcgill.ca.ORCID http://orcid.org/0000-0003-1359-5720
Arkady KhoutorskyDepartment of Anesthesia and Faculty of Dental Medicine and Oral Health Sciences, McGill University, Montréal, QC, Canada. arkady.khoutorsky@mcgill.ca.ORCID http://orcid.org/0000-0003-3846-8728
McGill University · CAMontreal Neurological Institute and Hospital · CAMcGill Genome Centre · CAMcGill University Health Centre · CAUniversity of Illinois Chicago · USUniversity of Toronto · CA

Funding

CIHR FRN-154281CIHR PJT-162412
6 · The paper itself

Abstract

Activation of microglia in the spinal cord following peripheral nerve injury is critical for the development of long-lasting pain hypersensitivity. However, it remains unclear whether distinct microglia subpopulations or states contribute to different stages of pain development and maintenance. Using single-cell RNA-sequencing, we show that peripheral nerve injury induces the generation of a male-specific inflammatory microglia subtype, and demonstrate increased proliferation of microglia in male as compared to female mice. We also show time- and sex-specific transcriptional changes in different microglial subpopulations following peripheral nerve injury. Apolipoprotein E (Apoe) is the top upregulated gene in spinal cord microglia at chronic time points after peripheral nerve injury in mice. Furthermore, polymorphisms in the APOE gene in humans are associated with chronic pain. Single-cell RNA sequencing analysis of human spinal cord microglia reveals a subpopulation with a disease-related transcriptional signature. Our data provide a detailed analysis of transcriptional states of mouse and human spinal cord microglia, and identify a link between ApoE and chronic pain in humans.

Indexed as

MicrogliaPeripheral Nerve InjuriesSequence Analysis, RNASpinal CordAnimalsApolipoproteins ECell ProliferationChronic PainFemaleGene ExpressionMaleMiceMice, Inbred C57BLPolymorphism, GeneticApolipoproteins E

Identifiers

PMID35149686
PMCPMC8837774
OpenAlexW4211063028

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.