Evidence map›Paper›PMID 35149672›Full record

ArticleNature communications2022

Protein nanowires with tunable functionality and programmable self-assembly using sequence-controlled synthesis.

Daniel Mark Shapiro, Gunasheil Mandava, Sibel Ebru Yalcin, Pol Arranz-Gibert, Peter J Dahl, Catharine Shipps, Yangqi Gu, Vishok Srikanth, Aldo I Salazar-Morales, J Patrick O'Brien and 5 more

Abstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Review
  2. Article
  3. Sources of non-Arrhenius electron transport in bacterial nanowires.Physical chemistry chemical physics : PCCP · 2026
    Article
  4. Review
  5. Review
  6. Article
  7. Conducting Atomic Force Microscopy of Protein Wires.Small (Weinheim an der Bergstrasse, Germany) · 2025
    Article
  8. Article
  9. Review
  10. Review
  11. Engineered Protein Hydrogels as Biomimetic Cellular Scaffolds.Advanced materials (Deerfield Beach, Fla.) · 2024
    Review
  12. Review
  13. Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Daniel Mark ShapiroDepartment of Molecular, Cellular & Developmental Biology, Yale University, New Haven, CT, 06520, USA.ORCID http://orcid.org/0000-0002-8327-2911
Gunasheil MandavaDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, 06520, USA.
Sibel Ebru YalcinDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, 06520, USA.ORCID http://orcid.org/0000-0002-6041-5297
Pol Arranz-GibertDepartment of Molecular, Cellular & Developmental Biology, Yale University, New Haven, CT, 06520, USA.
Peter J DahlDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, 06520, USA.
Catharine ShippsDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, 06520, USA.ORCID http://orcid.org/0000-0001-8397-1096
Yangqi GuDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, 06520, USA.ORCID http://orcid.org/0000-0002-8206-8804
Vishok SrikanthDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, 06520, USA.ORCID http://orcid.org/0000-0003-2498-4641
Aldo I Salazar-MoralesDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, 06520, USA.ORCID http://orcid.org/0000-0002-8126-9460
J Patrick O'BrienDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, 06520, USA.
Koen VanderschurenDepartment of Molecular, Cellular & Developmental Biology, Yale University, New Haven, CT, 06520, USA.
Dennis VuDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, 06520, USA.ORCID http://orcid.org/0000-0002-2623-963X
Victor S BatistaDepartment of Chemistry, Yale University, New Haven, CT, 06520, USA.ORCID http://orcid.org/0000-0002-3262-1237
Nikhil S Malvankar *Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, 06520, USA. nikhil.malvankar@yale.edu.ORCID http://orcid.org/0000-0001-5611-6633
Farren J Isaacs *Department of Molecular, Cellular & Developmental Biology, Yale University, New Haven, CT, 06520, USA. farren.isaacs@yale.edu.ORCID http://orcid.org/0000-0001-8615-8236

Funding

Engineering a recoded organism to discover PTM-mediated protein bindersR01GM140481 · NIGMS · YALE UNIVERSITY · PI Farren J. Isaacs · 2020 to 2026
$3.3M
Targeting bacterial infections by imaging electrical interactions between host surface pathogensDP2AI138259 · NIAID · YALE UNIVERSITY · PI MALVANKAR, NIKHIL · 2017 to 2017
$2.5M
The impact of stress neurohormones on health and agingR01GM140480 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI ALKEMA, MARK · 2021 to 2024
$1.5M
NIAID NIH HHS DP2 AI138259NIGMS NIH HHS R01 GM140480NIGMS NIH HHS R01 GM140481
6 · The paper itself

Abstract

Advances in synthetic biology permit the genetic encoding of synthetic chemistries at monomeric precision, enabling the synthesis of programmable proteins with tunable properties. Bacterial pili serve as an attractive biomaterial for the development of engineered protein materials due to their ability to self-assemble into mechanically robust filaments. However, most biomaterials lack electronic functionality and atomic structures of putative conductive proteins are not known. Here, we engineer high electronic conductivity in pili produced by a genomically-recoded E. coli strain. Incorporation of tryptophan into pili increased conductivity of individual filaments >80-fold. Computationally-guided ordering of the pili into nanostructures increased conductivity 5-fold compared to unordered pili networks. Site-specific conjugation of pili with gold nanoparticles, facilitated by incorporating the nonstandard amino acid propargyloxy-phenylalanine, increased filament conductivity ~170-fold. This work demonstrates the sequence-defined production of highly-conductive protein nanowires and hybrid organic-inorganic biomaterials with genetically-programmable electronic functionalities not accessible in nature or through chemical-based synthesis.

Indexed as

Electric ConductivityNanowiresChemical PhenomenaEscherichia coliFimbriae, BacterialFimbriae ProteinsGoldMetal NanoparticlesNanostructuresPhenylalanineProtein EngineeringProteinsTryptophanFimbriae ProteinsGoldPhenylalanineProteinsTryptophan

Identifiers

PMID35149672
PMCPMC8837800

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.