Evidence map›Paper›PMID 35149585›Full record

ArticleCancer research2022

A Short Isoform of Spermatogenic Enzyme GAPDHS Functions as a Metabolic Switch and Limits Metastasis in Melanoma.

Jennifer G Gill, Samantha N Leef, Vijayashree Ramesh, Misty S Martin-Sandoval, Aparna D Rao, Lindsey West, Sarah Muh, Wen Gu, Zhiyu Zhao, Gregory A Hosler and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Jennifer G GillUniversity of Texas Southwestern Medical Center, Department of Dermatology, Dallas, Texas.ORCID 0000-0001-7167-7359
Samantha N LeefChildren's Medical Center Research Institute, University of Texas Southwestern Medical Center, Dallas, Texas.ORCID 0000-0001-7420-1890
Vijayashree RameshChildren's Medical Center Research Institute, University of Texas Southwestern Medical Center, Dallas, Texas.
Misty S Martin-SandovalChildren's Medical Center Research Institute, University of Texas Southwestern Medical Center, Dallas, Texas.
Aparna D RaoChildren's Medical Center Research Institute, University of Texas Southwestern Medical Center, Dallas, Texas.
Lindsey WestUniversity of Texas Southwestern Medical Center, Department of Dermatology, Dallas, Texas.
Sarah MuhChildren's Medical Center Research Institute, University of Texas Southwestern Medical Center, Dallas, Texas.
Wen GuChildren's Medical Center Research Institute, University of Texas Southwestern Medical Center, Dallas, Texas.ORCID 0000-0002-3003-8945
Zhiyu ZhaoChildren's Medical Center Research Institute, University of Texas Southwestern Medical Center, Dallas, Texas.
Gregory A HoslerUniversity of Texas Southwestern Medical Center, Department of Dermatology, Dallas, Texas.ORCID 0000-0002-6281-0565
Travis W VandergriffUniversity of Texas Southwestern Medical Center, Department of Dermatology, Dallas, Texas.
Alison B DurhamUniversity of Michigan, Department of Dermatology, Ann Arbor, Michigan.
Thomas P MathewsChildren's Medical Center Research Institute, University of Texas Southwestern Medical Center, Dallas, Texas.
Arin B AuroraChildren's Medical Center Research Institute, University of Texas Southwestern Medical Center, Dallas, Texas.
The University of Texas Southwestern Medical Center · USPeter MacCallum Cancer Centre · AUPropath Services (United States) · USUniversity of Michigan · US

Funding

Michigan Institute for Clinical and Health Research (MICHR)UL1TR002240 · NCATS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LUMENG, JULIE C, MASHOUR, GEORGE ALEXANDER · 2017 to 2022
$54.9M
Dermatology Research Training ProgramT32AR065969 · NIAMS · UT SOUTHWESTERN MEDICAL CENTER · PI PONCIANO D CRUZ, Tamia Alisha Harris-Tryon · 2014 to 2026
$1.6M
NCATS NIH HHS UL1 TR002240NIAMS NIH HHS T32 AR065969
6 · The paper itself

Abstract

Despite being the leading cause of cancer deaths, metastasis remains a poorly understood process. To identify novel regulators of metastasis in melanoma, we performed a large-scale RNA sequencing screen of 48 samples from patient-derived xenograft (PDX) subcutaneous melanomas and their associated metastases. In comparison with primary tumors, expression of glycolytic genes was frequently decreased in metastases, whereas expression of some tricarboxylic acid (TCA) cycle genes was increased in metastases. Consistent with these transcriptional changes, melanoma metastases underwent a metabolic switch characterized by decreased levels of glycolytic metabolites and increased abundance of TCA cycle metabolites. A short isoform of glyceraldehyde-3-phosphate dehydrogenase, spermatogenic (GAPDHS) lacking the N-terminal domain suppressed metastasis and regulated this metabolic switch. GAPDHS was downregulated in metastatic nodules from PDX models as well as in human patients. Overexpression of GAPDHS was sufficient to block melanoma metastasis, whereas its inhibition promoted metastasis, decreased glycolysis, and increased levels of certain TCA cycle metabolites and their derivatives including citrate, fumarate, malate, and aspartate. Isotope tracing studies indicated that GAPDHS mediates this shift through changes in pyruvate carboxylase activity and aspartate synthesis, both metabolic pathways critical for cancer survival and metastasis. Together, these data identify a short isoform of GAPDHS that limits melanoma metastasis and regulates central carbon metabolism. SIGNIFICANCE: This study characterizes metabolic changes during cancer metastasis and identifies GAPDHS as a novel regulator of these processes in melanoma cells.

Indexed as

Glyceraldehyde-3-Phosphate DehydrogenasesMelanomaCitric Acid CycleGlyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)GlycolysisHumansProtein IsoformsSpermatogenesisGAPDHS protein, humanGlyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)Glyceraldehyde-3-Phosphate DehydrogenasesProtein Isoforms

Identifiers

PMID35149585
PMCPMC9014487
OpenAlexW4211051258

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.