Evidence map›Paper›PMID 35148176›Full record

ArticleScience advances2022

The pore conformation of lymphocyte perforin.

Marina E Ivanova, Natalya Lukoyanova, Sony Malhotra, Maya Topf, Joseph A Trapani, Ilia Voskoboinik, Helen R Saibil

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 38 citations in OpenAlex.

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  7. Forest Bathing (Medical sciences (Basel, Switzerland) · 2026
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  14. For Better or Worse: The Impact of Necrotic Cell Death Modalities.Advances in experimental medicine and biology · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 3 countries.

Marina E IvanovaInstitute of Structural and Molecular Biology, Birkbeck, University of London, Malet St, London WC1E 7HX, UK.
Natalya LukoyanovaInstitute of Structural and Molecular Biology, Birkbeck, University of London, Malet St, London WC1E 7HX, UK.ORCID 0000-0002-2051-0812
Sony MalhotraInstitute of Structural and Molecular Biology, Birkbeck, University of London, Malet St, London WC1E 7HX, UK.ORCID 0000-0002-3165-9081
Maya TopfInstitute of Structural and Molecular Biology, Birkbeck, University of London, Malet St, London WC1E 7HX, UK.ORCID 0000-0002-8185-1215
Joseph A TrapaniPeter MacCallum Cancer Centre, 305 Grattan St, Melbourne, VIC 3000, Australia.ORCID 0000-0003-0983-1532
Ilia VoskoboinikPeter MacCallum Cancer Centre, 305 Grattan St, Melbourne, VIC 3000, Australia.ORCID 0000-0002-6410-009X
Helen R SaibilInstitute of Structural and Molecular Biology, Birkbeck, University of London, Malet St, London WC1E 7HX, UK.ORCID 0000-0002-2266-8891
Birkbeck, University of London · GBPeter MacCallum Cancer Centre · AUHammersmith Hospital · GBScience and Technology Facilities Council · GBUniversität Hamburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Perforin is a pore-forming protein that facilitates rapid killing of pathogen-infected or cancerous cells by the immune system. Perforin is released from cytotoxic lymphocytes, together with proapoptotic granzymes, to bind to a target cell membrane where it oligomerizes and forms pores. The pores allow granzyme entry, which rapidly triggers the apoptotic death of the target cell. Here, we present a 4-Å resolution cryo-electron microscopy structure of the perforin pore, revealing previously unidentified inter- and intramolecular interactions stabilizing the assembly. During pore formation, the helix-turn-helix motif moves away from the bend in the central β sheet to form an intermolecular contact. Cryo-electron tomography shows that prepores form on the membrane surface with minimal conformational changes. Our findings suggest the sequence of conformational changes underlying oligomerization and membrane insertion, and explain how several pathogenic mutations affect function.

Identifiers

PMID35148176
PMCPMC8836823
OpenAlexW4211062668

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.