Evidence map›Paper›PMID 35147935›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2022

Single-Cell Single-Molecule Pull-Down (sc-SiMPull) for Detection of Protein Complexes from Embryonic Lysates.

Naomi Stolpner, Daniel J Dickinson

Open access · greenAbstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Exploring Biophysics at the Membrane with Single-Molecule TIRF Microscopy.Advances in experimental medicine and biology · 2026
    Review
  2. Article
  3. Article
  4. Dimerization activates the Inversin complex inMolecular biology of the cell · 2024
    Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Naomi StolpnerDepartment of Molecular Biosciences, University of Texas at Austin, Austin, TX, USA.
Daniel J DickinsonDepartment of Molecular Biosciences, University of Texas at Austin, Austin, TX, USA. daniel.dickinson@austin.utexas.edu.
The University of Texas at Austin · US

Funding

Understanding developmental control of cell polarity using single-cell in vivo biochemistryR01GM138443 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI DICKINSON, DANIEL J · 2020 to 2025
$2.4M
Biochemical Basis of Cell Polarization by the PAR Protein SystemR00GM115964 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI DICKINSON, DANIEL J · 2018 to 2020
$747k
Biochemical Basis of Cell Polarization by the PAR Protein SystemK99GM115964 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DICKINSON, DANIEL J · 2015 to 2016
$180k
NIGMS NIH HHS K99 GM115964NIGMS NIH HHS R00 GM115964NIGMS NIH HHS R01 GM138443
6 · The paper itself

Abstract

Mapping how proteins form complexes and change binding partners is central to understanding cell signaling. Bulk biochemistry can provide a summary of what complexes are present in a cell, but information about the diversity of individual protein complexes is lost. Here, we describe single-cell , single-molecule pull-down (sc-SiMPull), a TIRF microscopy-based coimmunoprecipitation method, to visualize thousands of individual proteins, their binding partners, and protein complex stoichiometry directly from single-cell lysate. By iterating sc-SiMPull over time, temporal dynamics of protein complexes in response to signaling can be constructed.

Indexed as

BiochemistryProteinsImmunoprecipitationMicroscopy, FluorescenceProteinsBiochemistryCell polarityDevelopmentMicrofluidicsSingle cellSingle moleculeTIRF

Identifiers

PMID35147935
PMCPMC8851684
OpenAlexW4211068691

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.