Evidence map›Paper›PMID 35147803›Full record

ArticleArchives of virology2022

Molecular typing of enteroviruses and parechoviruses in acute flaccid paralysis patients in Iran in 2019.

Ahmad Nejati, Parastoo Soheili, Soodeh Yousefipoor, Seyed Mohsen Zahraei, Sussan Mahmoudi, Maryam Yousefi, Yaghoob Mollaei-Kandelous, Katayoun Samimi-Rad, Hamideh Tabatabaie, Farshad Khodakhah and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Ahmad NejatiNational Polio Laboratory, Department of Virology, School of Public Health, Tehran University of Medical Sciences, Tehran, 14716-13151, Iran.ORCID http://orcid.org/0000-0003-2435-3065
Parastoo SoheiliNational Polio Laboratory, Department of Virology, School of Public Health, Tehran University of Medical Sciences, Tehran, 14716-13151, Iran.
Soodeh YousefipoorNational Polio Laboratory, Department of Virology, School of Public Health, Tehran University of Medical Sciences, Tehran, 14716-13151, Iran.
Seyed Mohsen ZahraeiVaccine Preventable Diseases Department, Center for Communicable Diseases Control, Ministry of Health and Medical Education, Tehran, Iran.
Sussan MahmoudiVaccine Preventable Diseases Department, Center for Communicable Diseases Control, Ministry of Health and Medical Education, Tehran, Iran.
Maryam YousefiNational Polio Laboratory, Department of Virology, School of Public Health, Tehran University of Medical Sciences, Tehran, 14716-13151, Iran.
Yaghoob Mollaei-KandelousNational Polio Laboratory, Department of Virology, School of Public Health, Tehran University of Medical Sciences, Tehran, 14716-13151, Iran.
Katayoun Samimi-RadNational Polio Laboratory, Department of Virology, School of Public Health, Tehran University of Medical Sciences, Tehran, 14716-13151, Iran.
Hamideh TabatabaieNational Polio Laboratory, Department of Virology, School of Public Health, Tehran University of Medical Sciences, Tehran, 14716-13151, Iran.
Farshad KhodakhahNational Polio Laboratory, Department of Virology, School of Public Health, Tehran University of Medical Sciences, Tehran, 14716-13151, Iran.
Shohreh ShahmahmoodiNational Polio Laboratory, Department of Virology, School of Public Health, Tehran University of Medical Sciences, Tehran, 14716-13151, Iran. shahmahmoodi@tums.ac.ir.ORCID http://orcid.org/0000-0001-5520-8050
Tehran University of Medical Sciences · IRMinistry of Health and Medical Education · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Enteroviruses (EVs) and parechoviruses (PeVs) are among the viral pathogens that can cause acute flaccid paralysis (AFP). There is not sufficient information about direct detection of EVs and PeVs in AFP patients in Iran. The aim of this study was to conduct a one-year study for direct detection and molecular typing of EVs and PeVs from stool samples of AFP patients in Iran. One hundred stool samples from polio-negative AFP patients who were referred to the Iran National Polio Laboratory were randomly chosen and analyzed during 2019. A one-step TaqMan probe-based real-time RT-PCR assay targeting the 5'-untranslated region (5' -UTR) was used to screen for EVs and PeVs. All positive samples were genotyped by direct sequencing, targeting the VP1 region of the genome. In total, twelve (12%) and four (4%) stool samples from polio-negative AFP children were positive for EVs and PeVs, respectively. Sequence analysis revealed the presence of echovirus 2 (E2), echovirus 13 (E13), echovirus 25 (E25), echovirus 30 (E30), coxsackievirus A2 (CVA2), coxsackievirus A9 (CVA9), coxsackievirus A16 (CVA16), human enterovirus A76 (HEV-A76), and human parechovirus 1 (HPeV1) in children with AFP-like symptoms. Phylogenetic analysis showed that E2 strains clustered together with the strains circulating in the Netherlands during 2014, whereas the PeV strains belonged to different lineages. This study demonstrates that different EV types are associated with AFP cases in Iran. However, the frequency of association of PeVs with AFP cases appears to be low.

Indexed as

EnterovirusEnterovirus InfectionsParechovirusCentral Nervous System Viral DiseasesChildFecesHumansIranMolecular TypingMyelitisNeuromuscular DiseasesParalysisPhylogeny

Identifiers

PMID35147803
OpenAlexW4211093979

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.