Evidence map›Paper›PMID 35146495›Full record

ArticleFaculty reviews2021

Functional genomics of supergene-controlled behavior in the white-throated sparrow.

Peter W H Holland, Chris D Jiggins, Miriam Liedvogel, Graham Warren, Yannick Wurm

Open access · diamondAbstract readComment
In one paragraph

Article in Faculty reviews, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 91% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Peter W H HollandUniversity of Oxford.ORCID https://orcid.org/0000-0003-1533-9376
Chris D JigginsUniversity of Cambridge.ORCID https://orcid.org/0000-0002-7809-062X
Miriam LiedvogelInstitute of Avian Research 'Vogelwarte Helgoland'; Max Planck Institute for Evolutionary Biology.ORCID https://orcid.org/0000-0002-8372-8560
Graham WarrenLMCB, University College London.
Yannick WurmQueen Mary University of London; Alan Turing Institute.ORCID https://orcid.org/0000-0002-3140-2809
University of Cambridge · GBUniversity of Oxford · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Supergenes are regions of suppressed recombination that may span hundreds of genes and can control variation in key ecological phenotypes. Since genetic analysis is made impossible by the absence of recombination between genes, it has been difficult to establish how individual genes within these regions contribute to supergene-controlled phenotypes. The white-throated sparrow is a classic example in which a supergene controls behavioral differences as well as distinct coloration that determines mate choice. A landmark study now demonstrates that differences between supergene variants in the promoter sequences of a hormone receptor gene change its expression and control changes in behavior. To unambiguously establish the link between genotype and phenotype, the authors used antisense oligonucleotides to alter the level of gene expression in a focal brain region targeted through a cannula. The study showcases a powerful approach to the functional genomic manipulation of a wild vertebrate species.

Indexed as

ESR1GenomicPhenotypesSupergene

Identifiers

PMID35146495
PMCPMC8803343
OpenAlexW3202490247

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.