Evidence map›Paper›PMID 35146412›Full record

ArticleJournal of structural biology: X2022

Recent advances in the structural biology of encapsulin bacterial nanocompartments.

Timothy Wiryaman, Navtej Toor

Abstract read
In one paragraph

Article in Journal of structural biology: X, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. The Structural Diversity of Encapsulin Protein Shells.Chembiochem : a European journal of chemical biology · 2024
    Review
  3. Review
  4. Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Article
  6. Structure and heterogeneity of a highly cargo-loaded encapsulin shell.bioRxiv : the preprint server for biology · 2023
    Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Timothy WiryamanUniversity of California, San Diego, 9500 Gilman Dr, La Jolla, CA 92093, USA.
Navtej ToorUniversity of California, San Diego, 9500 Gilman Dr, La Jolla, CA 92093, USA.

Funding

GENETIC MECHANISMS AND REGULATIONT32GM007240 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMPTON, RANDOLPH Y. · 1985 to 2019
$23.8M
Structural Biology of Retrotransposition and pre-mRNA SplicingR35GM141706 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Navtej Singh Toor · 2021 to 2026
$2.6M
NIGMS NIH HHS R35 GM141706NIGMS NIH HHS T32 GM007240
6 · The paper itself

Abstract

Large capsid-like nanocompartments called encapsulins are common in bacteria and archaea and contain cargo proteins with diverse functions. Advances in cryo-electron microscopy have enabled structure determination of many encapsulins in recent years. Here we summarize findings from recent encapsulin structures that have significant implications for their biological roles. We also compare important features such as the E-loop, cargo-peptide binding site, and the fivefold axis channel in different structures. In addition, we describe the discovery of a flavin-binding pocket within the encapsulin shell that may reveal a role for this nanocompartment in iron metabolism.

Indexed as

CompartmentalizationCryo-electron microscopyEncapsulinNanocompartmentsStructural biologyX-ray crystallography

Identifiers

PMID35146412
PMCPMC8802124

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.